RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 C14orf79Q96F83 325 aa3.1□□□□□ -1.91
CLK1-213ENST00000492793 ELMO2Q96JJ3 720 aa3.1□□□□□ -1.91
CLK1-213ENST00000492793 RPAP3Q9H6T3 665 aaPredicted RBP3.1□□□□□ -1.91
CLK1-213ENST00000492793 KAT8Q9H7Z6 458 aaKnown RBP3.1□□□□□ -1.91
CLK1-213ENST00000492793 VAT1LQ9HCJ6 419 aa3.1□□□□□ -1.91
CLK1-213ENST00000492793 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.1□□□□□ -1.91
CLK1-213ENST00000492793 C1orf123Q9NWV4 160 aa3.1□□□□□ -1.91
CLK1-213ENST00000492793 KLRF1Q9NZS2 232 aa3.1□□□□□ -1.91
CLK1-213ENST00000492793 ZNF581Q9P0T4 197 aa3.1□□□□□ -1.91
CLK1-213ENST00000492793 ACTR3BQ9P1U1 418 aa3.1□□□□□ -1.91
CLK1-213ENST00000492793 P2RX2Q9UBL9 471 aa3.1□□□□□ -1.91
CLK1-213ENST00000492793 ISY1Q9ULR0 285 aaKnown RBP3.1□□□□□ -1.91
CLK1-213ENST00000492793 DHRS7Q9Y394 339 aa3.1□□□□□ -1.91
CLK1-213ENST00000492793 IGHV3OR16-12A0A075B7B8 117 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 A0A087WWV3 80 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 FAM230AA0A1W2PPH8 454 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 ZNF840PA6NDX5 716 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 ANKRD30BLA7E2S9 258 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 NPIPA2E9PIF3 369 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 H0YL77 283 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 TYROBPO43914 113 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 ZNF354AO60765 605 aaPredicted RBP3.09□□□□□ -1.91
CLK1-213ENST00000492793 TOM1L1O75674 476 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 WNT2P09544 360 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 UMPSP11172 480 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 PTPN4P29074 926 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 PTPN6P29350 595 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 MAGEA9P43362 315 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 ARHGDIBP52566 201 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 METAP1P53582 386 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 LMO4P61968 165 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 NUCB2P80303 420 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 ZNF85Q03923 595 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 ZNF33BQ06732 778 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 PEX6Q13608 980 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 RUNX3Q13761 415 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 RFTN1Q14699 578 aaPredicted RBP3.09□□□□□ -1.91
CLK1-213ENST00000492793 RAB35Q15286 201 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 ZIC1Q15915 447 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 MICAQ29983 383 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 LRIT3Q3SXY7 679 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 TIMM50Q3ZCQ8 353 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 HSP90AA5PQ58FG0 334 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 MARC1Q5VT66 337 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 ZCCHC12Q6PEW1 402 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 UNC5DQ6UXZ4 953 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 LPCAT2Q7L5N7 544 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 ERASQ7Z444 233 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 SERINC5Q86VE9 423 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 MCOLN2Q8IZK6 566 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.09□□□□□ -1.91
CLK1-213ENST00000492793 FLVCR1-AS1Q8TAF5 88 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 VN1R17PQ8TDU5 208 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 DQX1Q8TE96 717 aaKnown RBP3.09□□□□□ -1.91
CLK1-213ENST00000492793 DNAJA3Q96EY1 480 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 WRAP53Q9BUR4 548 aaKnown RBP3.09□□□□□ -1.91
CLK1-213ENST00000492793 CLEC5AQ9NY25 188 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 MGAT4BQ9UQ53 548 aa3.09□□□□□ -1.91
CLK1-213ENST00000492793 COL5A2P05997 1499 aaPredicted RBP3.09□□□□□ -1.92
CLK1-213ENST00000492793 BICDL2A1A5D9 508 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 ZSCAN5CA6NGD5 496 aaPredicted RBP3.08□□□□□ -1.92
CLK1-213ENST00000492793 CYSRT1A8MQ03 144 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 H3BTX0 84 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 LCMT2O60294 686 aaKnown RBP3.08□□□□□ -1.92
CLK1-213ENST00000492793 IGFBP1P08833 259 aaPredicted RBP3.08□□□□□ -1.92
CLK1-213ENST00000492793 HOXB7P09629 217 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 ALPIP09923 528 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 FUT1P19526 365 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 BCL3P20749 454 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 FNTAP49354 379 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 BPIFB3P59826 476 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 POLR2FP61218 127 aaKnown RBP3.08□□□□□ -1.92
CLK1-213ENST00000492793 OSTNP61366 133 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 PPIAP62937 165 aaKnown RBP3.08□□□□□ -1.92
CLK1-213ENST00000492793 MRPS6P82932 125 aaKnown RBP3.08□□□□□ -1.92
CLK1-213ENST00000492793 HSF2Q03933 536 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 EXOSC2Q13868 293 aaKnown RBP3.08□□□□□ -1.92
CLK1-213ENST00000492793 LTB4RQ15722 352 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 INAQ16352 499 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 SLC25A30Q5SVS4 291 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 LINC00242Q5T6M2 205 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 SCYL2Q6P3W7 929 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 ZNF562Q6V9R5 426 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 ZNF600Q6ZNG1 722 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 NET1Q7Z628 596 aaPredicted RBP3.08□□□□□ -1.92
CLK1-213ENST00000492793 CERS5Q8N5B7 392 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 OR52B4Q8NGK2 314 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 TYMSOSQ8TAI1 123 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 ART4Q93070 314 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 MCHR2Q969V1 340 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 PINX1Q96BK5 328 aaKnown RBP3.08□□□□□ -1.92
CLK1-213ENST00000492793 WBP1Q96G27 269 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 PIWIL1Q96J94 861 aaKnown RBP3.08□□□□□ -1.92
CLK1-213ENST00000492793 FOXN4Q96NZ1 517 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 DPH5Q9H2P9 285 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 STARD5Q9NSY2 213 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 ATP6V1HQ9UI12 483 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 NTNG1Q9Y2I2 539 aa3.08□□□□□ -1.92
CLK1-213ENST00000492793 RNF115Q9Y4L5 304 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms