RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 TMCO6Q96DC7 493 aa13.69□□□□□ -0.22
TOM1-215ENST00000491987 EGLN2Q96KS0 407 aa13.69□□□□□ -0.22
TOM1-215ENST00000491987 ADOQ96SZ5 270 aa13.69□□□□□ -0.22
TOM1-215ENST00000491987 TIMP4Q99727 224 aa13.69□□□□□ -0.22
TOM1-215ENST00000491987 STMN4Q9H169 189 aaPredicted RBP13.69□□□□□ -0.22
TOM1-215ENST00000491987 TUBB1Q9H4B7 451 aa13.69□□□□□ -0.22
TOM1-215ENST00000491987 GLIPR2Q9H4G4 154 aa13.69□□□□□ -0.22
TOM1-215ENST00000491987 SERHLQ9NQF3 203 aa13.69□□□□□ -0.22
TOM1-215ENST00000491987 TAS2R9Q9NYW1 312 aa13.69□□□□□ -0.22
TOM1-215ENST00000491987 WBP11Q9Y2W2 641 aaKnown RBP13.69□□□□□ -0.22
TOM1-215ENST00000491987 PCDHGB3Q9Y5G1 929 aa13.69□□□□□ -0.22
TOM1-215ENST00000491987 CACNA1CQ13936 2221 aa13.69□□□□□ -0.22
TOM1-215ENST00000491987 PHF3Q92576 2039 aaKnown RBP13.69□□□□□ -0.22
TOM1-215ENST00000491987 KDM4EB2RXH2 506 aaPredicted RBP13.68□□□□□ -0.22
TOM1-215ENST00000491987 TMEM233B4DJY2 109 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 TSPAN2O60636 221 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 SLU7O95391 586 aaKnown RBP13.68□□□□□ -0.22
TOM1-215ENST00000491987 CHEK2O96017 543 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 CHRNGP07510 517 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 LINC00032P0C843 101 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 IL12BP29460 328 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 KRT20P35900 424 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 WNT3P56703 355 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 RPL38P63173 70 aaKnown RBP13.68□□□□□ -0.22
TOM1-215ENST00000491987 KIAA0040Q15053 153 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 ACSF3Q4G176 576 aaPredicted RBP13.68□□□□□ -0.22
TOM1-215ENST00000491987 SH2D4BQ5SQS7 431 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 DCST1Q5T197 706 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 KANK2Q63ZY3 851 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 VASNQ6EMK4 673 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 ANKRD26P1Q6NSI1 321 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 WDR93Q6P2C0 686 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 Q6ZSR9 355 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 SEM1Q6ZVN7 128 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 LARP4Q71RC2 724 aaKnown RBP eCLIP13.68□□□□□ -0.22
TOM1-215ENST00000491987 LIX1LQ8IVB5 337 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 FAM83FQ8NEG4 500 aaPredicted RBP13.68□□□□□ -0.22
TOM1-215ENST00000491987 OR4N2Q8NGD1 307 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 EFHD2Q96C19 240 aaPredicted RBP13.68□□□□□ -0.22
TOM1-215ENST00000491987 SLC35A4Q96G79 324 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 METTL2AQ96IZ6 378 aaKnown RBP13.68□□□□□ -0.22
TOM1-215ENST00000491987 LURAP1Q96LR2 239 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 AMDHD1Q96NU7 426 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 TREX2Q9BQ50 279 aaPredicted RBP13.68□□□□□ -0.22
TOM1-215ENST00000491987 UGT2B28Q9BY64 529 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 C1orf109Q9NX04 203 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 TAS2R7Q9NYW3 318 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 CAMK2AQ9UQM7 478 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 OR10H1Q9Y4A9 318 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 DNAJC13O75165 2243 aa13.68□□□□□ -0.22
TOM1-215ENST00000491987 NINQ8N4C6 2090 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 A0A087WV62 115 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 FAM47E-STBD1D6RA91 191 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 NPIPB8E9PQR5 432 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 NPHS1O60500 1241 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 ABCB7O75027 752 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 SLITRK5O94991 958 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 NEFHP12036 1026 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 IGFBP2P18065 325 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 BMP7P18075 431 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 MSX1P28360 303 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 SSTR2P30874 369 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 PSG6Q00889 435 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 EFR3AQ14156 821 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 ARL13AQ5H913 290 aaPredicted RBP13.67□□□□□ -0.22
TOM1-215ENST00000491987 RIPPLY2Q5TAB7 128 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 ZCCHC23Q6ZST2 131 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 DDIASQ8IXT1 998 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 PM20D2Q8IYS1 436 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 WDSUB1Q8N9V3 476 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 CLHC1Q8NHS4 586 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 AGR3Q8TD06 166 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 TCP10LQ8TDR4 215 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 TWIST2Q8WVJ9 160 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 CAVIN3Q969G5 261 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 FCRL1Q96LA6 429 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 CCT7Q99832 543 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 ROPN1BQ9BZX4 212 aaPredicted RBP13.67□□□□□ -0.22
TOM1-215ENST00000491987 PRDM14Q9GZV8 571 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 ROPN1Q9HAT0 212 aaPredicted RBP13.67□□□□□ -0.22
TOM1-215ENST00000491987 DDX18Q9NVP1 670 aaKnown RBP13.67□□□□□ -0.22
TOM1-215ENST00000491987 TRAF6Q9Y4K3 522 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 DNAJC15Q9Y5T4 150 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 FBN2P35556 2912 aa13.67□□□□□ -0.22
TOM1-215ENST00000491987 ENO4A6NNW6 628 aa13.66□□□□□ -0.22
TOM1-215ENST00000491987 AHRRA9YTQ3 701 aa13.66□□□□□ -0.22
TOM1-215ENST00000491987 UPK1AO00322 258 aa13.66□□□□□ -0.22
TOM1-215ENST00000491987 PLOD2O00469 737 aa13.66□□□□□ -0.22
TOM1-215ENST00000491987 PIP5K1BO14986 540 aa13.66□□□□□ -0.22
TOM1-215ENST00000491987 PDPK1O15530 556 aa13.66□□□□□ -0.22
TOM1-215ENST00000491987 AKAP10O43572 662 aa13.66□□□□□ -0.22
TOM1-215ENST00000491987 CBR3O75828 277 aa13.66□□□□□ -0.22
TOM1-215ENST00000491987 FGF4P08620 206 aa13.66□□□□□ -0.22
TOM1-215ENST00000491987 CREB1P16220 341 aa13.66□□□□□ -0.22
TOM1-215ENST00000491987 SDC1P18827 310 aa13.66□□□□□ -0.22
TOM1-215ENST00000491987 PNLIPRP2P54317 469 aa13.66□□□□□ -0.22
TOM1-215ENST00000491987 PSPHP78330 225 aa13.66□□□□□ -0.22
TOM1-215ENST00000491987 TLE4Q04727 773 aa13.66□□□□□ -0.22
TOM1-215ENST00000491987 GALNTL6Q49A17 601 aa13.66□□□□□ -0.22
TOM1-215ENST00000491987 RFTN2Q52LD8 501 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms