RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 CLEC6AQ6EIG7 209 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 NOXRED1Q6NXP6 359 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 NAXEQ8NCW5 288 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 TNIP2Q8NFZ5 429 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 OR4N2Q8NGD1 307 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 FAM76AQ8TAV0 307 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 SLC35A4Q96G79 324 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 WDYHV1Q96HA8 205 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 EGLN2Q96KS0 407 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 COL21A1Q96P44 957 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 ADOQ96SZ5 270 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 GATA5Q9BWX5 397 aaPredicted RBP16.41■□□□□ 0.22
HMGN1-219ENST00000491183 MYNNQ9NPC7 610 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 SERHLQ9NQF3 203 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 RRAGDQ9NQL2 400 aaPredicted RBP16.41■□□□□ 0.22
HMGN1-219ENST00000491183 KLRF1Q9NZS2 232 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 MAPRE3Q9UPY8 281 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 PTGDR2Q9Y5Y4 395 aa16.41■□□□□ 0.22
HMGN1-219ENST00000491183 TLDC2A0PJX2 215 aa16.4■□□□□ 0.22
HMGN1-219ENST00000491183 FAM47E-STBD1D6RA91 191 aa16.4■□□□□ 0.22
HMGN1-219ENST00000491183 CRCPO75575 148 aa16.4■□□□□ 0.22
HMGN1-219ENST00000491183 JUNP05412 331 aaKnown RBP16.4■□□□□ 0.22
HMGN1-219ENST00000491183 TACR1P25103 407 aa16.4■□□□□ 0.22
HMGN1-219ENST00000491183 ERCC6LQ2NKX8 1250 aa16.4■□□□□ 0.22
HMGN1-219ENST00000491183 POMZP3Q6PJE2 187 aa16.4■□□□□ 0.22
HMGN1-219ENST00000491183 Q6ZSR9 355 aa16.4■□□□□ 0.22
HMGN1-219ENST00000491183 PM20D2Q8IYS1 436 aa16.4■□□□□ 0.22
HMGN1-219ENST00000491183 RNF138Q8WVD3 245 aa16.4■□□□□ 0.22
HMGN1-219ENST00000491183 ABTB1Q969K4 478 aaPredicted RBP16.4■□□□□ 0.22
HMGN1-219ENST00000491183 TMCO6Q96DC7 493 aa16.4■□□□□ 0.22
HMGN1-219ENST00000491183 GLIPR2Q9H4G4 154 aa16.4■□□□□ 0.22
HMGN1-219ENST00000491183 TAS2R9Q9NYW1 312 aa16.4■□□□□ 0.22
HMGN1-219ENST00000491183 CAMK2AQ9UQM7 478 aa16.4■□□□□ 0.22
HMGN1-219ENST00000491183 A0A087WV62 115 aa16.39■□□□□ 0.21
HMGN1-219ENST00000491183 HSPB2A8KAH6 182 aa16.39■□□□□ 0.21
HMGN1-219ENST00000491183 B4DXG7 233 aa16.39■□□□□ 0.21
HMGN1-219ENST00000491183 NPIPB8E9PQR5 432 aa16.39■□□□□ 0.21
HMGN1-219ENST00000491183 CBR3O75828 277 aa16.39■□□□□ 0.21
HMGN1-219ENST00000491183 CAPN3P20807 821 aa16.39■□□□□ 0.21
HMGN1-219ENST00000491183 PRPH2P23942 346 aa16.39■□□□□ 0.21
HMGN1-219ENST00000491183 MC3RP41968 323 aa16.39■□□□□ 0.21
HMGN1-219ENST00000491183 NCBP2P52298 156 aaKnown RBP eCLIP16.39■□□□□ 0.21
HMGN1-219ENST00000491183 PNLIPRP2P54317 469 aa16.39■□□□□ 0.21
HMGN1-219ENST00000491183 PSG6Q00889 435 aa16.39■□□□□ 0.21
HMGN1-219ENST00000491183 HSPB2Q16082 182 aa16.39■□□□□ 0.21
HMGN1-219ENST00000491183 SLC25A35Q3KQZ1 300 aa16.39■□□□□ 0.21
HMGN1-219ENST00000491183 WDR53Q7Z5U6 358 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-219ENST00000491183 SLC44A2Q8IWA5 706 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-219ENST00000491183 CLYBLQ8N0X4 340 aa16.39■□□□□ 0.21
HMGN1-219ENST00000491183 RELL2Q8NC24 303 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-219ENST00000491183 OR2T11Q8NH01 316 aa16.39■□□□□ 0.21
HMGN1-219ENST00000491183 OR2B2Q9GZK3 357 aa16.39■□□□□ 0.21
HMGN1-219ENST00000491183 STMN4Q9H169 189 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-219ENST00000491183 TUBB1Q9H4B7 451 aa16.39■□□□□ 0.21
HMGN1-219ENST00000491183 MIEF1Q9NQG6 463 aa16.39■□□□□ 0.21
HMGN1-219ENST00000491183 WBP11Q9Y2W2 641 aaKnown RBP16.39■□□□□ 0.21
HMGN1-219ENST00000491183 OTOGQ6ZRI0 2925 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 PLOD2O00469 737 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 AZIN1O14977 448 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 TRIM13O60858 407 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 ABCB7O75027 752 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 SEC22BO75396 215 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 ACTL6AO96019 429 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 TIMP3P35625 211 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 GAS1P54826 345 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 VSNL1P62760 191 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 NSUN5P2Q63ZY6 315 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 TMEM107Q6UX40 140 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 LARP4Q71RC2 724 aaKnown RBP eCLIP16.38■□□□□ 0.21
HMGN1-219ENST00000491183 TRABD2AQ86V40 505 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 PLCZ1Q86YW0 608 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 LACC1Q8IV20 430 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 BANPQ8N9N5 519 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 EFHD2Q96C19 240 aaPredicted RBP16.38■□□□□ 0.21
HMGN1-219ENST00000491183 METTL2AQ96IZ6 378 aaKnown RBP16.38■□□□□ 0.21
HMGN1-219ENST00000491183 AMDHD1Q96NU7 426 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 MKS1Q9NXB0 559 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 SENP1Q9P0U3 644 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 KCNN3Q9UGI6 736 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 FBXL2Q9UKC9 423 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 C19orf53Q9UNZ5 99 aaPredicted RBP16.38■□□□□ 0.21
HMGN1-219ENST00000491183 L3MBTL1Q9Y468 752 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 TACC2O95359 2948 aa16.38■□□□□ 0.21
HMGN1-219ENST00000491183 CD8B2A6NJW9 211 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 C17orf51A8MQB3 221 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 UPK1AO00322 258 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 SLC28A1O00337 649 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 PSMG1O95456 288 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 CYP4B1P13584 511 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 POU3F2P20265 443 aaPredicted RBP16.37■□□□□ 0.21
HMGN1-219ENST00000491183 ALDH3A1P30838 453 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 ZNF136P52737 540 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 SNTB1Q13884 538 aaKnown RBP16.37■□□□□ 0.21
HMGN1-219ENST00000491183 EFR3AQ14156 821 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 OR5M10Q6IEU7 315 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 IKBIPQ70UQ0 350 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 TRIM42Q8IWZ5 723 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 ELP4Q96EB1 424 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 FCRL1Q96LA6 429 aa16.37■□□□□ 0.21
HMGN1-219ENST00000491183 TRIB1Q96RU8 372 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms