RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	OR52R1	Q8NGF1	315 aa		13.78	□□□□□ -0.2
AGAP3-222	ENST00000490839	KCTD4	Q8WVF5	259 aa		13.78	□□□□□ -0.2
AGAP3-222	ENST00000490839	TMBIM1	Q969X1	311 aa		13.78	□□□□□ -0.2
AGAP3-222	ENST00000490839	NXNL1	Q96CM4	212 aa		13.78	□□□□□ -0.2
AGAP3-222	ENST00000490839	SLC35A4	Q96G79	324 aa		13.78	□□□□□ -0.2
AGAP3-222	ENST00000490839	ZNF845	Q96IR2	970 aa	Predicted RBP	13.78	□□□□□ -0.2
AGAP3-222	ENST00000490839	PIGQ	Q9BRB3	760 aa		13.78	□□□□□ -0.2
AGAP3-222	ENST00000490839	AHSP	Q9NZD4	102 aa		13.78	□□□□□ -0.2
AGAP3-222	ENST00000490839	HEY2	Q9UBP5	337 aa		13.78	□□□□□ -0.2
AGAP3-222	ENST00000490839	CES1P1	Q9UKY3	287 aa		13.78	□□□□□ -0.2
AGAP3-222	ENST00000490839	ACOT9	Q9Y305	439 aa		13.78	□□□□□ -0.2
AGAP3-222	ENST00000490839	SNX24	Q9Y343	169 aa		13.78	□□□□□ -0.2
AGAP3-222	ENST00000490839	TNPO3	Q9Y5L0	923 aa	Known RBP	13.78	□□□□□ -0.2
AGAP3-222	ENST00000490839	LRRC14B	A6NHZ5	514 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	CCDC188	H7C350	402 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	EMC8	O43402	210 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	ZIC3	O60481	467 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	ERAL1	O75616	437 aa	Known RBP	13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	REM1	O75628	298 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	ABCA1	O95477	2261 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	CGA	P01215	116 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	PEPD	P12955	493 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	DPP4	P27487	766 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	FEN1	P39748	380 aa	Known RBP	13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	KCNJ5	P48544	419 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	EMD	P50402	254 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	EEFSEC	P57772	596 aa	Known RBP	13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	B3GALT5-AS1	P59052	145 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	PSPH	P78330	225 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	EFR3A	Q14156	821 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	FAM83E	Q2M2I3	478 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	CCNYL2	Q5T2Q4	361 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	FRG2	Q64ET8	278 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	C3orf62	Q6ZUJ4	267 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	PPM1N	Q8N819	430 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	TRPC4AP	Q8TEL6	797 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	TMEM171	Q8WVE6	324 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	ZC3HAV1L	Q96H79	300 aa	Known RBP	13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	FRG2B	Q96QU4	278 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	MRPL1	Q9BYD6	325 aa	Known RBP	13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	CXorf56	Q9H5V9	222 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	ZNF701	Q9NV72	531 aa	Predicted RBP	13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839	NBEAL1	Q6ZS30	2694 aa		13.77	□□□□□ -0.21
AGAP3-222	ENST00000490839		A0A087X1B8	175 aa		13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	TCEA1	P23193	301 aa	Known RBP	13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	GRK2	P25098	689 aa		13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	ARL1	P40616	181 aa	Predicted RBP	13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	IRF9	Q00978	393 aa		13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	KRTAP1-1	Q07627	177 aa		13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	NAB1	Q13506	487 aa		13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	BEX5	Q5H9J7	111 aa		13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	CREG2	Q8IUH2	290 aa		13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	UBQLNL	Q8IYU4	475 aa		13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	METTL4	Q8N3J2	472 aa		13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	OR4K17	Q8NGC6	315 aa		13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	RNF138	Q8WVD3	245 aa		13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	FIG4	Q92562	907 aa		13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	KLHL29	Q96CT2	875 aa		13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	BTBD9	Q96Q07	612 aa		13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	CDK15	Q96Q40	435 aa		13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	NOL11	Q9H8H0	719 aa	Known RBP	13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	RNF122	Q9H9V4	155 aa		13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	PSME2	Q9UL46	239 aa		13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	GPR55	Q9Y2T6	319 aa	Predicted RBP	13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	ZNF175	Q9Y473	711 aa		13.76	□□□□□ -0.21
AGAP3-222	ENST00000490839	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	TNFRSF21	O75509	655 aa		13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	BCAS2	O75934	225 aa	Predicted RBP	13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	SIX3	O95343	332 aa	Predicted RBP	13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	PCSK2	P16519	638 aa		13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	IL12B	P29460	328 aa		13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	KRT20	P35900	424 aa		13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	DSCR4	P56555	118 aa	Predicted RBP	13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	MRPS35	P82673	323 aa	Known RBP	13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	DUSP2	Q05923	314 aa		13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	DMTN	Q08495	405 aa		13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	CALCOCO2	Q13137	446 aa		13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	ACAP2	Q15057	778 aa		13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	LTB4R	Q15722	352 aa		13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	TRMT12	Q53H54	448 aa	Known RBP	13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	TTC19	Q6DKK2	380 aa	Predicted RBP	13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	OR5M10	Q6IEU7	315 aa		13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	COMMD6	Q7Z4G1	85 aa		13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	ATP6V1E2	Q96A05	226 aa		13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	ERP27	Q96DN0	273 aa		13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	ADO	Q96SZ5	270 aa		13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	WHRN	Q9P202	907 aa		13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	PROCR	Q9UNN8	238 aa		13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839	ANK3	Q12955	4377 aa	Known RBP	13.75	□□□□□ -0.21
AGAP3-222	ENST00000490839		B4DXG7	233 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	LINC01387	J3KSC0	135 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	OR7A17	O14581	309 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	ZSCAN12	O43309	604 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	TSPAN2	O60636	221 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	C2	P06681	752 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	PPP3CB	P16298	524 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	TBXA2R	P21731	343 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	STX2	P32856	288 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	CCNG1	P51959	295 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms