RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 MPLP40238 635 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 ADH7P40394 386 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 ACTR1BP42025 376 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 DHPSP49366 369 aaPredicted RBP7.94□□□□□ -1.14
VTI1A-207ENST00000489357 UGT2B15P54855 530 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 ACTR1AP61163 376 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 SNRPGP62308 76 aaKnown RBP7.94□□□□□ -1.14
VTI1A-207ENST00000489357 SKP1P63208 163 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 BNC1Q01954 994 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 TNFRSF17Q02223 184 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 PLAURQ03405 335 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.94□□□□□ -1.14
VTI1A-207ENST00000489357 PPP1R8Q12972 351 aaKnown RBP7.94□□□□□ -1.14
VTI1A-207ENST00000489357 PUM1Q14671 1186 aaKnown RBP eCLIP7.94□□□□□ -1.14
VTI1A-207ENST00000489357 DUSP7Q16829 419 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 TMEM201Q5SNT2 666 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 SLC25A30Q5SVS4 291 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 DCST1Q5T197 706 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 ATAD3BQ5T9A4 648 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 MEDAGQ5VYS4 303 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 RNLSQ5VYX0 342 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 LYSMD4Q5XG99 296 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 AP1ARQ63HQ0 302 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 TCTN3Q6NUS6 607 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 TNFAIP8L2Q6P589 184 aaPredicted RBP7.94□□□□□ -1.14
VTI1A-207ENST00000489357 P2RY8Q86VZ1 359 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 DNAJC22Q8N4W6 341 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 DEFB119Q8N690 84 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 FAM46DQ8NEK8 389 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 OR13H1Q8NG92 308 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 FLVCR1-AS1Q8TAF5 88 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 CEP76Q8TAP6 659 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 CNIH3Q8TBE1 160 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 KLK6Q92876 244 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 BORCS5Q969J3 196 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 PRRC1Q96M27 445 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 HSPA12BQ96MM6 686 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 ZNF681Q96N22 645 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 MS4A4EQ96PG1 132 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 FUNDC2Q9BWH2 189 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 PRRG3Q9BZD7 231 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 AICDAQ9GZX7 198 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 ARRDC1-AS1Q9H2J1 176 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 OR51I1Q9H343 314 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 XKR8Q9H6D3 395 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 NMNAT1Q9HAN9 279 aaPredicted RBP7.94□□□□□ -1.14
VTI1A-207ENST00000489357 ACOT13Q9NPJ3 140 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 SEMA4GQ9NTN9 838 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 GIN1Q9NXP7 522 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 ZNF624Q9P2J8 865 aaPredicted RBP7.94□□□□□ -1.14
VTI1A-207ENST00000489357 WARS2Q9UGM6 360 aaKnown RBP7.94□□□□□ -1.14
VTI1A-207ENST00000489357 PILRAQ9UKJ1 303 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 B3GNT3Q9Y2A9 372 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 ATG4BQ9Y4P1 393 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 A3GALT2U3KPV4 340 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 ARHGEF17Q96PE2 2063 aaPredicted RBP7.94□□□□□ -1.14
VTI1A-207ENST00000489357 HEATR5BQ9P2D3 2071 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 KNTC1P50748 2209 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 CFAP54Q96N23 3096 aa7.94□□□□□ -1.14
VTI1A-207ENST00000489357 CACNA1AO00555 2505 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 A0A087WV62 115 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 IRGMA1A4Y4 181 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 PRAMEF25A6NGN4 478 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 SHISA8B8ZZ34 492 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 B3GALT2O43825 422 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 B4GALT2O60909 372 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 CLPXO76031 633 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 LGI1O95970 557 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 RECKO95980 971 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 AK1P00568 194 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 SERPIND1P05546 499 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 CDK1P06493 297 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 CYP4B1P13584 511 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 MAOBP27338 520 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 PRKAR1BP31321 381 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 SOX18P35713 384 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 OR1E2P47887 323 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 LIMK1P53667 647 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 CRISP1P54107 249 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 GP2P55259 537 aaKnown RBP7.93□□□□□ -1.14
VTI1A-207ENST00000489357 TUBA1BP68363 451 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 HPCAP84074 193 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 IL1RL1Q01638 556 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 MAPK11Q15759 364 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 ALG11Q2TAA5 492 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 TIMM50Q3ZCQ8 353 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 WDR45BQ5MNZ6 344 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 SLX4IPQ5VYV7 408 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 ANKRD34AQ69YU3 496 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 FRMPD2BQ6IN97 320 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 SLC16A12Q6ZSM3 486 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 USP53Q70EK8 1073 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 TUBA1AQ71U36 451 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 RNF44Q7L0R7 432 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 VN1R4Q7Z5H5 301 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 CCDC71Q8IV32 467 aaPredicted RBP7.93□□□□□ -1.14
VTI1A-207ENST00000489357 TRIM48Q8IWZ4 208 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 MMP21Q8N119 569 aa7.93□□□□□ -1.14
VTI1A-207ENST00000489357 LRRC25Q8N386 305 aaPredicted RBP7.93□□□□□ -1.14
VTI1A-207ENST00000489357 SDR16C5Q8N3Y7 309 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms