RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ZFHX3Q15911 3703 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 ROBO3Q96MS0 1386 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 IGLV3-10A0A075B6K4 115 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 MAGEB16A2A368 324 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 P2RX6O15547 441 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 ST8SIA3O43173 380 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 MLNRO43193 412 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 HTATSF1O43719 755 aaKnown RBP3.41□□□□□ -1.86
ITGB1-214ENST00000488427 IGHG1P01857 330 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 FOLR2P14207 255 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 GP9P14770 177 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 CPA3P15088 417 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 CCR4P51679 360 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 HMGCS2P54868 508 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 PEX3P56589 373 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 BACE1P56817 501 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 ST8SIA6P61647 398 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 BTG1P62324 171 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 TRA2BP62995 288 aaKnown RBP3.41□□□□□ -1.86
ITGB1-214ENST00000488427 NFE2L1Q14494 772 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 MEP1BQ16820 701 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 CCDC152Q4G0S7 254 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 EPC2Q52LR7 807 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 ZNF506Q5JVG8 444 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 RNLSQ5VYX0 342 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 REP15Q6BDI9 236 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 TIPARPQ7Z3E1 657 aaKnown RBP3.41□□□□□ -1.86
ITGB1-214ENST00000488427 TMCO2Q7Z6W1 182 aaPredicted RBP3.41□□□□□ -1.86
ITGB1-214ENST00000488427 FGFRL1Q8N441 504 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 RHOXF1Q8NHV9 184 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 CFAP36Q96G28 342 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 ZNF577Q9BSK1 485 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 RAB9BQ9NP90 201 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 PLEK2Q9NYT0 353 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 ZNF581Q9P0T4 197 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 RAB23Q9ULC3 237 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 SPATA2Q9UM82 520 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 SH3GLB1Q9Y371 365 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 TMED7Q9Y3B3 224 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 SYNRGQ9UMZ2 1314 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 MAPK8IP3Q9UPT6 1336 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 UTP20O75691 2785 aaKnown RBP3.4□□□□□ -1.86
ITGB1-214ENST00000488427 ASCC3Q8N3C0 2202 aaKnown RBP3.4□□□□□ -1.86
ITGB1-214ENST00000488427 TP53BP1Q12888 1972 aaPredicted RBP3.4□□□□□ -1.86
ITGB1-214ENST00000488427 SYT7O43581 403 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 GJB5O95377 273 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 ASGR1P07306 291 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 SKILP12757 684 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 PPP2R1BP30154 601 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 RFC2P35250 354 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 TCF7P36402 384 aaPredicted RBP3.4□□□□□ -1.87
ITGB1-214ENST00000488427 FHITP49789 147 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 PPIAP62937 165 aaKnown RBP3.4□□□□□ -1.87
ITGB1-214ENST00000488427 CDKL1Q00532 357 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 SPP2Q13103 211 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 ATRQ13535 2644 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 CACNA1EQ15878 2313 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 KBTBD12Q3ZCT8 623 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 EIPR1Q53HC9 387 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 CCDC158Q5M9N0 1113 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 ZNF730Q6ZMV8 503 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 COPS6Q7L5N1 327 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 DENND4AQ7Z401 1863 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 NUFIP2Q7Z417 695 aaKnown RBP3.4□□□□□ -1.87
ITGB1-214ENST00000488427 CEACAM19Q7Z692 300 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 KRT77Q7Z794 578 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 SERINC5Q86VE9 423 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 LINC00612Q8N6U2 182 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 GVQW1Q8N7I0 195 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 AGAP11Q8TF27 550 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 FAM151AQ8WW52 585 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 RUNDC3BQ96NL0 473 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 SPAG8Q99932 426 aaPredicted RBP3.4□□□□□ -1.87
ITGB1-214ENST00000488427 HSD17B14Q9BPX1 270 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 SLC39A8Q9C0K1 460 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 ELL3Q9HB65 397 aaPredicted RBP3.4□□□□□ -1.87
ITGB1-214ENST00000488427 SEPT10Q9P0V9 454 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 CIDEBQ9UHD4 219 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 LIPT1Q9Y234 373 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 NEUROG3Q9Y4Z2 214 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 STYXL1Q9Y6J8 313 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 DLG5Q8TDM6 1919 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 MYH2Q9UKX2 1941 aa3.4□□□□□ -1.87
ITGB1-214ENST00000488427 NBEAL1Q6ZS30 2694 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 PLXNA4Q9HCM2 1894 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 A0A087X0K7 114 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 IGHV3-16A0A0C4DH30 117 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 H0Y626 953 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 K7EQG2 157 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 KIAA0513O60268 411 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 GLCEO94923 617 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 SLC16A8O95907 504 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 IGKV3-15P01624 115 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 CALML3P27482 149 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 MATKP42679 507 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 BRCC3P46736 316 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 KHKP50053 298 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 NOVA1P51513 510 aaKnown RBP3.39□□□□□ -1.87
ITGB1-214ENST00000488427 KCNK10P57789 538 aa3.39□□□□□ -1.87
ITGB1-214ENST00000488427 STX1BP61266 288 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms