RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 MPIP34949 423 aa17.6■□□□□ 0.41
CD55-209ENST00000488171 NAA20P61599 178 aa17.6■□□□□ 0.41
CD55-209ENST00000488171 C2orf80Q0P641 193 aa17.6■□□□□ 0.41
CD55-209ENST00000488171 SNTB1Q13884 538 aaKnown RBP17.6■□□□□ 0.41
CD55-209ENST00000488171 CCDC153Q494R4 210 aa17.6■□□□□ 0.41
CD55-209ENST00000488171 CES4AQ5XG92 561 aa17.6■□□□□ 0.41
CD55-209ENST00000488171 FAM71E1Q6IPT2 247 aa17.6■□□□□ 0.41
CD55-209ENST00000488171 ARSKQ6UWY0 536 aa17.6■□□□□ 0.41
CD55-209ENST00000488171 TMCO6Q96DC7 493 aa17.6■□□□□ 0.41
CD55-209ENST00000488171 ADOQ96SZ5 270 aa17.6■□□□□ 0.41
CD55-209ENST00000488171 SH3GL2Q99962 352 aa17.6■□□□□ 0.41
CD55-209ENST00000488171 SHCBP1LQ9BZQ2 653 aa17.6■□□□□ 0.41
CD55-209ENST00000488171 OR2B2Q9GZK3 357 aa17.6■□□□□ 0.41
CD55-209ENST00000488171 GRID1Q9ULK0 1009 aa17.6■□□□□ 0.41
CD55-209ENST00000488171 CD8B2A6NJW9 211 aa17.59■□□□□ 0.41
CD55-209ENST00000488171 H3BQF6 201 aa17.59■□□□□ 0.41
CD55-209ENST00000488171 SYT5O00445 386 aa17.59■□□□□ 0.41
CD55-209ENST00000488171 CBR3O75828 277 aa17.59■□□□□ 0.41
CD55-209ENST00000488171 ACTL6AO96019 429 aa17.59■□□□□ 0.41
CD55-209ENST00000488171 CCT5P48643 541 aa17.59■□□□□ 0.41
CD55-209ENST00000488171 ZNF136P52737 540 aa17.59■□□□□ 0.41
CD55-209ENST00000488171 IMPG1Q17R60 797 aa17.59■□□□□ 0.41
CD55-209ENST00000488171 CDC26Q8NHZ8 85 aa17.59■□□□□ 0.41
CD55-209ENST00000488171 RDH11Q8TC12 318 aa17.59■□□□□ 0.41
CD55-209ENST00000488171 EPS8L3Q8TE67 593 aaKnown RBP17.59■□□□□ 0.41
CD55-209ENST00000488171 RNF138Q8WVD3 245 aa17.59■□□□□ 0.41
CD55-209ENST00000488171 BBS4Q96RK4 519 aa17.59■□□□□ 0.41
CD55-209ENST00000488171 TRIB1Q96RU8 372 aa17.59■□□□□ 0.41
CD55-209ENST00000488171 MYNNQ9NPC7 610 aa17.59■□□□□ 0.41
CD55-209ENST00000488171 OXSMQ9NWU1 459 aa17.59■□□□□ 0.41
CD55-209ENST00000488171 ZNF629Q9UEG4 869 aaPredicted RBP17.59■□□□□ 0.41
CD55-209ENST00000488171 CCL27Q9Y4X3 112 aa17.59■□□□□ 0.41
CD55-209ENST00000488171 POLR3HQ9Y535 204 aaPredicted RBP17.59■□□□□ 0.41
CD55-209ENST00000488171 MBD3L4A6NDZ8 208 aaPredicted RBP17.58■□□□□ 0.4
CD55-209ENST00000488171 MBD3L3A6NE82 208 aaPredicted RBP17.58■□□□□ 0.4
CD55-209ENST00000488171 MBD3L5A6NJ08 208 aaPredicted RBP17.58■□□□□ 0.4
CD55-209ENST00000488171 SMIM23A6NLE4 172 aa17.58■□□□□ 0.4
CD55-209ENST00000488171 DVL2O14641 736 aa17.58■□□□□ 0.4
CD55-209ENST00000488171 IL2RAP01589 272 aa17.58■□□□□ 0.4
CD55-209ENST00000488171 CPA3P15088 417 aa17.58■□□□□ 0.4
CD55-209ENST00000488171 SF3B4Q15427 424 aaKnown RBP eCLIP17.58■□□□□ 0.42e-6■■□□□ 12.5
CD55-209ENST00000488171 LARP4Q71RC2 724 aaKnown RBP eCLIP17.58■□□□□ 0.4
CD55-209ENST00000488171 TMEM200AQ86VY9 491 aa17.58■□□□□ 0.4
CD55-209ENST00000488171 PLCZ1Q86YW0 608 aa17.58■□□□□ 0.4
CD55-209ENST00000488171 SLC44A2Q8IWA5 706 aaPredicted RBP17.58■□□□□ 0.4
CD55-209ENST00000488171 OR4N2Q8NGD1 307 aa17.58■□□□□ 0.4
CD55-209ENST00000488171 MBD3L2Q8NHZ7 208 aaPredicted RBP17.58■□□□□ 0.4
CD55-209ENST00000488171 FAM76AQ8TAV0 307 aa17.58■□□□□ 0.4
CD55-209ENST00000488171 STMN4Q9H169 189 aaPredicted RBP17.58■□□□□ 0.4
CD55-209ENST00000488171 PPCSQ9HAB8 311 aa17.58■□□□□ 0.4
CD55-209ENST00000488171 TAS2R9Q9NYW1 312 aa17.58■□□□□ 0.4
CD55-209ENST00000488171 TAS2R7Q9NYW3 318 aa17.58■□□□□ 0.4
CD55-209ENST00000488171 SENP1Q9P0U3 644 aa17.58■□□□□ 0.4
CD55-209ENST00000488171 FBXL2Q9UKC9 423 aa17.58■□□□□ 0.4
CD55-209ENST00000488171 WIF1Q9Y5W5 379 aa17.58■□□□□ 0.4
CD55-209ENST00000488171 CELSR1Q9NYQ6 3014 aa17.58■□□□□ 0.4
CD55-209ENST00000488171 A0A087WV62 115 aa17.57■□□□□ 0.4
CD55-209ENST00000488171 B4DXG7 233 aa17.57■□□□□ 0.4
CD55-209ENST00000488171 CRCPO75575 148 aa17.57■□□□□ 0.4
CD55-209ENST00000488171 RSL1D1O76021 490 aaKnown RBP17.57■□□□□ 0.4
CD55-209ENST00000488171 JUNP05412 331 aaKnown RBP17.57■□□□□ 0.4
CD55-209ENST00000488171 CPN1P15169 458 aa17.57■□□□□ 0.4
CD55-209ENST00000488171 UQCRC1P31930 480 aa17.57■□□□□ 0.4
CD55-209ENST00000488171 ASCL1P50553 236 aa17.57■□□□□ 0.4
CD55-209ENST00000488171 NCBP2P52298 156 aaKnown RBP eCLIP17.57■□□□□ 0.4
CD55-209ENST00000488171 GAS1P54826 345 aa17.57■□□□□ 0.4
CD55-209ENST00000488171 PSPHP78330 225 aa17.57■□□□□ 0.4
CD55-209ENST00000488171 PSG6Q00889 435 aa17.57■□□□□ 0.4
CD55-209ENST00000488171 EFR3AQ14156 821 aa17.57■□□□□ 0.4
CD55-209ENST00000488171 FBXL19-AS1Q494R0 122 aa17.57■□□□□ 0.4
CD55-209ENST00000488171 CFAP157Q5JU67 520 aa17.57■□□□□ 0.4
CD55-209ENST00000488171 OR14L1PQ8NHC6 308 aa17.57■□□□□ 0.4
CD55-209ENST00000488171 ZPLD1Q8TCW7 415 aa17.57■□□□□ 0.4
CD55-209ENST00000488171 CALHM2Q9HA72 323 aa17.57■□□□□ 0.4
CD55-209ENST00000488171 COPEO14579 308 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 ZWINTO95229 277 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 UROSP10746 265 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 KRT4P19013 534 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 IL12BP29460 328 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 MC3RP41968 323 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 PNLIPRP2P54317 469 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 GFRA1P56159 465 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 SLC18A2Q05940 514 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 KIAA0040Q15053 153 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 CLEC6AQ6EIG7 209 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 NOXRED1Q6NXP6 359 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 TMEM107Q6UX40 140 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 TRIM42Q8IWZ5 723 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 ZZZ3Q8IYH5 903 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 CCDC63Q8NA47 563 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 EFHD2Q96C19 240 aaPredicted RBP17.56■□□□□ 0.4
CD55-209ENST00000488171 TUBA1CQ9BQE3 449 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 GLIPR2Q9H4G4 154 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 L2HGDHQ9H9P8 463 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 MIEF1Q9NQG6 463 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 RRAGDQ9NQL2 400 aaPredicted RBP17.56■□□□□ 0.4
CD55-209ENST00000488171 CRIM1Q9NZV1 1036 aa17.56■□□□□ 0.4
CD55-209ENST00000488171 C19orf53Q9UNZ5 99 aaPredicted RBP17.56■□□□□ 0.4
CD55-209ENST00000488171 WBP11Q9Y2W2 641 aaKnown RBP17.56■□□□□ 0.4
CD55-209ENST00000488171 PTGDR2Q9Y5Y4 395 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms