RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 LOC285095A0A1B0GVY8 99 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 MBLAC1A4D2B0 266 aaPredicted RBP15.61■□□□□ 0.09
COL7A1-210ENST00000487017 PPP6CO00743 305 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 SYN1P17600 705 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 CCDC58Q4VC31 144 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 TMEM173Q86WV6 379 aaPredicted RBP15.61■□□□□ 0.09
COL7A1-210ENST00000487017 OR4N5Q8IXE1 308 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 ZFP90Q8TF47 636 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 FKBP10Q96AY3 582 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 OR10A4Q9H209 315 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 CUEDC1Q9NWM3 386 aaPredicted RBP15.61■□□□□ 0.09
COL7A1-210ENST00000487017 PHYHO14832 338 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 ELOCQ15369 112 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 SFRP4Q6FHJ7 346 aaPredicted RBP15.6■□□□□ 0.09
COL7A1-210ENST00000487017 TMEM225Q6GV28 225 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 DESI1Q6ICB0 168 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 ARSKQ6UWY0 536 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 PXYLP1Q8TE99 480 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 MSLNLQ96KJ4 702 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 ATOH8Q96SQ7 321 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 SCO2O43819 266 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 PLCXD2Q0VAA5 305 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 COL28A1Q2UY09 1125 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 ZNF691Q5VV52 312 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 FAM180BQ6P0A1 224 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 ACVR1CQ8NER5 493 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 KCNN3Q9UGI6 736 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 KCNIP3Q9Y2W7 256 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 FMO6PO60774 539 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 AGTR1P30556 359 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 CPOXP36551 454 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 RIDAP52758 137 aaKnown RBP15.6■□□□□ 0.09
COL7A1-210ENST00000487017 NKAPLQ5M9Q1 402 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 RNF111Q6ZNA4 994 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 BEST3Q8N1M1 668 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 OR4K13Q8NH42 304 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 ZDHHC12Q96GR4 267 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 OR51E2Q9H255 320 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 WASF3Q9UPY6 502 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 ASB4Q9Y574 426 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 BORCS7-ASMTA0A0B4J1R7 106 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 M0R3H8 397 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 MAS1P04201 325 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 CDK1P06493 297 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 SFTPBP07988 381 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 CXCR4P61073 352 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 EMX1Q04741 257 aaPredicted RBP15.6■□□□□ 0.09
COL7A1-210ENST00000487017 ANKRD54Q6NXT1 300 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 GPR149Q86SP6 731 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 B3GNT7Q8NFL0 401 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 OR13C3Q8NGS6 347 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 TRMT10AQ8TBZ6 339 aaKnown RBP15.6■□□□□ 0.09
COL7A1-210ENST00000487017 ADAMTS19Q8TE59 1207 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 DEDD2Q8WXF8 326 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 DMRT3Q9NQL9 472 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 C5AR2Q9P296 337 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 AP1M2Q9Y6Q5 423 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 A0A0U1RQS6 177 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 HTR2AP28223 471 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 PIN1Q13526 163 aaPredicted RBP15.6■□□□□ 0.09
COL7A1-210ENST00000487017 SLC14A2Q15849 920 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 ALG10BQ5I7T1 473 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 FIP1L1Q6UN15 594 aaKnown RBP15.6■□□□□ 0.09
COL7A1-210ENST00000487017 ALDH16A1Q8IZ83 802 aa15.6■□□□□ 0.09
COL7A1-210ENST00000487017 PGCP20142 388 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 CRHBPP24387 322 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 COL9A2Q14055 689 aaPredicted RBP15.59■□□□□ 0.09
COL7A1-210ENST00000487017 RAB33AQ14088 237 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 RAB41Q5JT25 222 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 BCL2L15Q5TBC7 163 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 DOK4Q8TEW6 326 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 SAMD8Q96LT4 415 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 CLMPQ9H6B4 373 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 KLHL9Q9P2J3 617 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 ALDOCP09972 364 aaKnown RBP15.59■□□□□ 0.09
COL7A1-210ENST00000487017 SOX3P41225 446 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 SIM1P81133 766 aaPredicted RBP15.59■□□□□ 0.09
COL7A1-210ENST00000487017 LRFN4Q6PJG9 635 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 ZNF767PQ75MW2 155 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 TMEM25Q86YD3 366 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 URM1Q9BTM9 101 aaKnown RBP15.59■□□□□ 0.09
COL7A1-210ENST00000487017 SLA2Q9H6Q3 261 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 TAS2R8Q9NYW2 309 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 ATE1O95260 518 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 ERCC1P07992 297 aaPredicted RBP15.59■□□□□ 0.09
COL7A1-210ENST00000487017 DDCP20711 480 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 ARRB1P49407 418 aaPredicted RBP15.59■□□□□ 0.09
COL7A1-210ENST00000487017 PGM2L1Q6PCE3 622 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 TMEM205Q6UW68 189 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 GPR26Q8NDV2 337 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 SSX5O60225 188 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 ADRB3P13945 408 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 B3GNT8Q7Z7M8 397 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 TSNAXQ99598 290 aaKnown RBP15.59■□□□□ 0.09
COL7A1-210ENST00000487017 IL20RAQ9UHF4 553 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 C4AP0C0L4 1744 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 C4BP0C0L5 1744 aa15.59■□□□□ 0.09
COL7A1-210ENST00000487017 DOT1LQ8TEK3 1739 aa15.58■□□□□ 0.09
COL7A1-210ENST00000487017 SNRPD2P62316 118 aaKnown RBP15.58■□□□□ 0.09
COL7A1-210ENST00000487017 MAP4K2Q12851 820 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms