RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 CCSMST1Q4G0I0 132 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 ADNP2Q6IQ32 1131 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 ARL9Q6T311 187 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 RNF111Q6ZNA4 994 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 LACC1Q8IV20 430 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 PELI3Q8N2H9 469 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 SLC5A8Q8N695 610 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 NEK7Q8TDX7 302 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 DEDD2Q8WXF8 326 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 CREB3L1Q96BA8 519 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 HYLS1Q96M11 299 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 ASB16Q96NS5 453 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 INSM2Q96T92 566 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-228ENST00000486227 GON7Q9BXV9 100 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 GORASP2Q9H8Y8 452 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 EPHA6Q9UF33 1036 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 C17orf113A0A1B0GUU1 675 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 CLCA1A8K7I4 914 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 VSTM5A8MXK1 200 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 CPNE6O95741 557 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 DDCP20711 480 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 PRKCDQ05655 676 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 ZCCHC12Q6PEW1 402 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 ACOT4Q8N9L9 421 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 SIMC1Q8NDZ2 872 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 OR51A7Q8NH64 312 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 EDAQ92838 391 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 PEX11GQ96HA9 241 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 MKRN2Q9H000 416 aaKnown RBP10.43□□□□□ -0.74
HDAC6-228ENST00000486227 ZBTB20Q9HC78 741 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-228ENST00000486227 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-228ENST00000486227 MAB21L2Q9Y586 359 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 ENTPD2Q9Y5L3 495 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 ENPP4Q9Y6X5 453 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 NRXN2Q9P2S2 1712 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 SBF2Q86WG5 1849 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 TTC3P53804 2025 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 KIR2DS5A0A0G2JLQ3 304 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 A0A0G2JNG1 304 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 KIR2DS3K7RE56 304 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 RNASET2O00584 256 aaKnown RBP10.43□□□□□ -0.74
HDAC6-228ENST00000486227 KIR2DS5Q14953 304 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 C9orf50Q5SZB4 431 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 ATOH1Q92858 354 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-228ENST00000486227 RANBP3Q9H6Z4 567 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-228ENST00000486227 ABCG2Q9UNQ0 655 aa10.43□□□□□ -0.74
HDAC6-228ENST00000486227 PRSS38A1L453 326 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 PEX11BO96011 259 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 RENP00797 406 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 CBLP22681 906 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 CRISP1P54107 249 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 ADARB1P78563 741 aaKnown RBP10.42□□□□□ -0.74
HDAC6-228ENST00000486227 MAD2L1BPQ15013 274 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-228ENST00000486227 SF3B4Q15427 424 aaKnown RBP eCLIP10.42□□□□□ -0.749e-8■■■■□ 26.1
HDAC6-228ENST00000486227 UGT3A2Q3SY77 523 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 CPZQ66K79 652 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 GDPD1Q8N9F7 314 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 OSTF1Q92882 214 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 TESCQ96BS2 214 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 ACOT13Q9NPJ3 140 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 ACTR10Q9NZ32 417 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 NPAP1Q9NZP6 1156 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 GPR89AB7ZAQ6 455 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 PRRT4C9JH25 899 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 OR7A10O76100 309 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 CSTAP01040 98 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 GPR89BP0CG08 455 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 PRDX1Q06830 199 aaKnown RBP10.42□□□□□ -0.74
HDAC6-228ENST00000486227 VEZF1Q14119 521 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 SLC27A4Q6P1M0 643 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 METTL4Q8N3J2 472 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 GNPDA2Q8TDQ7 276 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 MED11Q9P086 117 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 PCDHA9Q9Y5H5 950 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 ANKRD34BA5PLL1 514 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 TMEM202A6NGA9 273 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 CLEC3AO75596 197 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 CHRNB1P11230 501 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 MAOBP27338 520 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 CTHP32929 405 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 IDUAP35475 653 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 SELENOWP63302 87 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 PUDPQ08623 228 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 SMAD4Q13485 552 aaKnown RBP10.42□□□□□ -0.74
HDAC6-228ENST00000486227 PARP16Q8N5Y8 322 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 OR2L5Q8NG80 312 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 NR4A3Q92570 626 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 METTL2AQ96IZ6 378 aaKnown RBP10.42□□□□□ -0.74
HDAC6-228ENST00000486227 ZFP3Q96NJ6 502 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 NEURL2Q9BR09 285 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 PDCD10Q9BUL8 212 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 SIAEQ9HAT2 523 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 THAP10Q9P2Z0 257 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-228ENST00000486227 CKLFQ9UBR5 152 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 MLXQ9UH92 298 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 NUFIP1Q9UHK0 495 aaKnown RBP10.42□□□□□ -0.74
HDAC6-228ENST00000486227 POLR1CO15160 346 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-228ENST00000486227 ADAM23O75077 832 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 RLN1P04808 185 aa10.42□□□□□ -0.74
HDAC6-228ENST00000486227 ZNF888P0CJ79 500 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms