RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 PLEKHF2Q9H8W4 249 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 DLL4Q9NR61 685 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 TAS2R10Q9NYW0 307 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 MCM8Q9UJA3 840 aa17.47■□□□□ 0.39
COL27A1-205ENST00000485397 URI1O94763 535 aaPredicted RBP17.46■□□□□ 0.39
COL27A1-205ENST00000485397 SUPT7LO94864 414 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 KRT6AP02538 564 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 KRT6BP04259 564 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 SNRPAP09012 282 aaKnown RBP17.46■□□□□ 0.39
COL27A1-205ENST00000485397 CTAGE8P0CG41 777 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 CT45A8P0DMV1 189 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 CT45A9P0DMV2 189 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 HOXB4P17483 251 aaPredicted RBP17.46■□□□□ 0.39
COL27A1-205ENST00000485397 TCEA1P23193 301 aaKnown RBP17.46■□□□□ 0.39
COL27A1-205ENST00000485397 ECHS1P30084 290 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 KRT6CP48668 564 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 HTR6P50406 440 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 LHX2P50458 406 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 CORO7P57737 925 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 KEAP1Q14145 624 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 POU4F3Q15319 338 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 CT45A2Q5DJT8 189 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 NPSR1Q6W5P4 371 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 IFNEQ86WN2 208 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 CTAGE4Q8IX94 777 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 GCNT2Q8N0V5 402 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 MMGT1Q8N4V1 131 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 NOA1Q8NC60 698 aaKnown RBP17.46■□□□□ 0.39
COL27A1-205ENST00000485397 WNT2BQ93097 391 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 SLC35A4Q96G79 324 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 TM9SF2Q99805 663 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 YIPF4Q9BSR8 244 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 SFXN3Q9BWM7 321 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 GALNT8Q9NY28 637 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 TMEM216Q9P0N5 145 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 CLCF1Q9UBD9 225 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 WIF1Q9Y5W5 379 aa17.46■□□□□ 0.39
COL27A1-205ENST00000485397 C17orf51A8MQB3 221 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 B4DXG7 233 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 PLOD2O00469 737 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 PCDH7O60245 1069 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 TSPAN2O60636 221 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 HRGP04196 525 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 HSD3B1P14060 373 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 HSD3B2P26439 372 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 SRD5A2P31213 254 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 CPA2P48052 419 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 CSTF3Q12996 717 aaKnown RBP17.45■□□□□ 0.38
COL27A1-205ENST00000485397 RASA2Q15283 850 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 DEFB113Q30KQ7 82 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 ZNF678Q5SXM1 525 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 METTL6Q8TCB7 284 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 APIPQ96GX9 242 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 VSTM2LQ96N03 204 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 SFXN2Q96NB2 322 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 ZFP3Q96NJ6 502 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 BTBD9Q96Q07 612 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 TMEM237Q96Q45 408 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 UCN2Q96RP3 112 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 ACPTQ9BZG2 426 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 TSPYL1Q9H0U9 437 aa17.45■□□□□ 0.38
COL27A1-205ENST00000485397 RPH3AQ9Y2J0 694 aaPredicted RBP17.45■□□□□ 0.38
COL27A1-205ENST00000485397 A0A087WUV0 522 aaPredicted RBP17.44■□□□□ 0.38
COL27A1-205ENST00000485397 A0A1W2PPR1 153 aa17.44■□□□□ 0.38
COL27A1-205ENST00000485397 DLX3O60479 287 aa17.44■□□□□ 0.38
COL27A1-205ENST00000485397 ABCB7O75027 752 aa17.44■□□□□ 0.38
COL27A1-205ENST00000485397 ULK1O75385 1050 aa17.44■□□□□ 0.38
COL27A1-205ENST00000485397 BCAS2O75934 225 aaPredicted RBP17.44■□□□□ 0.38
COL27A1-205ENST00000485397 DRD2P14416 443 aa17.44■□□□□ 0.38
COL27A1-205ENST00000485397 TAC1P20366 129 aa17.44■□□□□ 0.38
COL27A1-205ENST00000485397 HMOX2P30519 316 aa17.44■□□□□ 0.38
COL27A1-205ENST00000485397 CLDN18P56856 261 aa17.44■□□□□ 0.38
COL27A1-205ENST00000485397 WHAMMP3Q1A5X7 153 aa17.44■□□□□ 0.38
COL27A1-205ENST00000485397 GPRIN3Q6ZVF9 776 aa17.44■□□□□ 0.38
COL27A1-205ENST00000485397 LARP4Q71RC2 724 aaKnown RBP eCLIP17.44■□□□□ 0.38
COL27A1-205ENST00000485397 WFDC11Q8NEX6 87 aa17.44■□□□□ 0.38
COL27A1-205ENST00000485397 OR4N2Q8NGD1 307 aa17.44■□□□□ 0.38
COL27A1-205ENST00000485397 C16orf78Q8WTQ4 265 aa17.44■□□□□ 0.38
COL27A1-205ENST00000485397 DACH2Q96NX9 599 aa17.44■□□□□ 0.38
COL27A1-205ENST00000485397 ZNF382Q96SR6 550 aa17.44■□□□□ 0.38
COL27A1-205ENST00000485397 FOLH1BQ9HBA9 442 aa17.44■□□□□ 0.38
COL27A1-205ENST00000485397 DKKL1Q9UK85 242 aa17.44■□□□□ 0.38
COL27A1-205ENST00000485397 HRNRQ86YZ3 2850 aaPredicted RBP17.43■□□□□ 0.38
COL27A1-205ENST00000485397 GNG14A0A1W2PPG7 69 aa17.43■□□□□ 0.38
COL27A1-205ENST00000485397 ZIC3O60481 467 aa17.43■□□□□ 0.38
COL27A1-205ENST00000485397 TGM6O95932 706 aa17.43■□□□□ 0.38
COL27A1-205ENST00000485397 GRK2P25098 689 aa17.43■□□□□ 0.38
COL27A1-205ENST00000485397 GCAP28676 217 aa17.43■□□□□ 0.38
COL27A1-205ENST00000485397 KRT20P35900 424 aa17.43■□□□□ 0.38
COL27A1-205ENST00000485397 GAS1P54826 345 aa17.43■□□□□ 0.38
COL27A1-205ENST00000485397 BTKQ06187 659 aa17.43■□□□□ 0.38
COL27A1-205ENST00000485397 EFR3AQ14156 821 aa17.43■□□□□ 0.38
COL27A1-205ENST00000485397 ERCC6LQ2NKX8 1250 aa17.43■□□□□ 0.38
COL27A1-205ENST00000485397 AAGABQ6PD74 315 aa17.43■□□□□ 0.38
COL27A1-205ENST00000485397 SCIMPQ6UWF3 145 aa17.43■□□□□ 0.38
COL27A1-205ENST00000485397 SLC44A2Q8IWA5 706 aaPredicted RBP17.43■□□□□ 0.38
COL27A1-205ENST00000485397 OR7G2Q8NG99 324 aa17.43■□□□□ 0.38
COL27A1-205ENST00000485397 EFHD2Q96C19 240 aaPredicted RBP17.43■□□□□ 0.38
COL27A1-205ENST00000485397 ERP27Q96DN0 273 aa17.43■□□□□ 0.38
COL27A1-205ENST00000485397 EBPLQ9BY08 206 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms