RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 CHDHQ8NE62 594 aaPredicted RBP18.36■□□□□ 0.53
ACTB-212ENST00000484841 MBD3L2Q8NHZ7 208 aaPredicted RBP18.36■□□□□ 0.53
ACTB-212ENST00000484841 C16orf78Q8WTQ4 265 aa18.36■□□□□ 0.53
ACTB-212ENST00000484841 L3HYPDHQ96EM0 354 aa18.36■□□□□ 0.53
ACTB-212ENST00000484841 APIPQ96GX9 242 aa18.36■□□□□ 0.53
ACTB-212ENST00000484841 ADOQ96SZ5 270 aa18.36■□□□□ 0.53
ACTB-212ENST00000484841 TM9SF2Q99805 663 aa18.36■□□□□ 0.53
ACTB-212ENST00000484841 SH3GL2Q99962 352 aa18.36■□□□□ 0.53
ACTB-212ENST00000484841 EBPLQ9BY08 206 aa18.36■□□□□ 0.53
ACTB-212ENST00000484841 STMN4Q9H169 189 aaPredicted RBP18.36■□□□□ 0.53
ACTB-212ENST00000484841 MID1IP1Q9NPA3 183 aa18.36■□□□□ 0.53
ACTB-212ENST00000484841 SLC35C2Q9NQQ7 365 aa18.36■□□□□ 0.53
ACTB-212ENST00000484841 RASSF1Q9NS23 344 aa18.36■□□□□ 0.53
ACTB-212ENST00000484841 TAS2R9Q9NYW1 312 aa18.36■□□□□ 0.53
ACTB-212ENST00000484841 PSMC3IPQ9P2W1 217 aaPredicted RBP18.36■□□□□ 0.53
ACTB-212ENST00000484841 DKKL1Q9UK85 242 aa18.36■□□□□ 0.53
ACTB-212ENST00000484841 TIMM22Q9Y584 194 aa18.36■□□□□ 0.53
ACTB-212ENST00000484841 CSMD2Q7Z408 3487 aa18.35■□□□□ 0.53
ACTB-212ENST00000484841 A6NNC1 897 aa18.35■□□□□ 0.53
ACTB-212ENST00000484841 KDM4EB2RXH2 506 aaPredicted RBP18.35■□□□□ 0.53
ACTB-212ENST00000484841 ANXA4P09525 319 aaPredicted RBP18.35■□□□□ 0.53
ACTB-212ENST00000484841 CPN1P15169 458 aa18.35■□□□□ 0.53
ACTB-212ENST00000484841 DNASE1P24855 282 aa18.35■□□□□ 0.53
ACTB-212ENST00000484841 TACR1P25103 407 aa18.35■□□□□ 0.53
ACTB-212ENST00000484841 PTGDSP41222 190 aa18.35■□□□□ 0.53
ACTB-212ENST00000484841 AGFG1P52594 562 aaKnown RBP18.35■□□□□ 0.53
ACTB-212ENST00000484841 NAA20P61599 178 aa18.35■□□□□ 0.53
ACTB-212ENST00000484841 DCST1Q5T197 706 aa18.35■□□□□ 0.53
ACTB-212ENST00000484841 LARP4Q71RC2 724 aaKnown RBP eCLIP18.35■□□□□ 0.53
ACTB-212ENST00000484841 CHMP1BQ7LBR1 199 aa18.35■□□□□ 0.53
ACTB-212ENST00000484841 TRIM42Q8IWZ5 723 aa18.35■□□□□ 0.53
ACTB-212ENST00000484841 SLC35A4Q96G79 324 aa18.35■□□□□ 0.53
ACTB-212ENST00000484841 BTBD9Q96Q07 612 aa18.35■□□□□ 0.53
ACTB-212ENST00000484841 OR2B2Q9GZK3 357 aa18.35■□□□□ 0.53
ACTB-212ENST00000484841 ACBD3Q9H3P7 528 aa18.35■□□□□ 0.53
ACTB-212ENST00000484841 MIEF1Q9NQG6 463 aa18.35■□□□□ 0.53
ACTB-212ENST00000484841 TAS2R10Q9NYW0 307 aa18.35■□□□□ 0.53
ACTB-212ENST00000484841 TBK1Q9UHD2 729 aa18.35■□□□□ 0.53
ACTB-212ENST00000484841 WIF1Q9Y5W5 379 aa18.35■□□□□ 0.53
ACTB-212ENST00000484841 MED13LQ71F56 2210 aa18.34■□□□□ 0.53
ACTB-212ENST00000484841 H3BQF6 201 aa18.34■□□□□ 0.53
ACTB-212ENST00000484841 COQ9O75208 318 aa18.34■□□□□ 0.53
ACTB-212ENST00000484841 IL18BPO95998 194 aa18.34■□□□□ 0.53
ACTB-212ENST00000484841 MYL2P10916 166 aa18.34■□□□□ 0.53
ACTB-212ENST00000484841 PYGBP11216 843 aa18.34■□□□□ 0.53
ACTB-212ENST00000484841 GCAP28676 217 aa18.34■□□□□ 0.53
ACTB-212ENST00000484841 CPA2P48052 419 aa18.34■□□□□ 0.53
ACTB-212ENST00000484841 PNLIPRP2P54317 469 aa18.34■□□□□ 0.53
ACTB-212ENST00000484841 RAE1P78406 368 aaKnown RBP18.34■□□□□ 0.53
ACTB-212ENST00000484841 C2orf80Q0P641 193 aa18.34■□□□□ 0.53
ACTB-212ENST00000484841 SLC44A2Q8IWA5 706 aaPredicted RBP18.34■□□□□ 0.53
ACTB-212ENST00000484841 WDSUB1Q8N9V3 476 aa18.34■□□□□ 0.53
ACTB-212ENST00000484841 NTNG2Q96CW9 530 aa18.34■□□□□ 0.53
ACTB-212ENST00000484841 SFXN2Q96NB2 322 aa18.34■□□□□ 0.53
ACTB-212ENST00000484841 ZFP3Q96NJ6 502 aa18.34■□□□□ 0.53
ACTB-212ENST00000484841 ANKRA2Q9H9E1 313 aa18.34■□□□□ 0.53
ACTB-212ENST00000484841 FOLH1BQ9HBA9 442 aa18.34■□□□□ 0.53
ACTB-212ENST00000484841 CCM2LQ9NUG4 571 aaPredicted RBP18.34■□□□□ 0.53
ACTB-212ENST00000484841 ST6GALNAC2Q9UJ37 374 aa18.34■□□□□ 0.53
ACTB-212ENST00000484841 GLRA3O75311 464 aa18.33■□□□□ 0.52
ACTB-212ENST00000484841 CT45A8P0DMV1 189 aa18.33■□□□□ 0.52
ACTB-212ENST00000484841 CT45A9P0DMV2 189 aa18.33■□□□□ 0.52
ACTB-212ENST00000484841 SRD5A2P31213 254 aa18.33■□□□□ 0.52
ACTB-212ENST00000484841 HTR6P50406 440 aa18.33■□□□□ 0.52
ACTB-212ENST00000484841 CORO7P57737 925 aa18.33■□□□□ 0.52
ACTB-212ENST00000484841 PPP2R2AP63151 447 aa18.33■□□□□ 0.52
ACTB-212ENST00000484841 EEF1A1P68104 462 aaKnown RBP18.33■□□□□ 0.52
ACTB-212ENST00000484841 ZNF763Q0D2J5 394 aa18.33■□□□□ 0.52
ACTB-212ENST00000484841 ZNF155Q12901 538 aaPredicted RBP18.33■□□□□ 0.52
ACTB-212ENST00000484841 SLC29A2Q14542 456 aa18.33■□□□□ 0.52
ACTB-212ENST00000484841 CT45A2Q5DJT8 189 aa18.33■□□□□ 0.52
ACTB-212ENST00000484841 CFAP157Q5JU67 520 aa18.33■□□□□ 0.52
ACTB-212ENST00000484841 SH2D4BQ5SQS7 431 aa18.33■□□□□ 0.52
ACTB-212ENST00000484841 EEF1A1P5Q5VTE0 462 aa18.33■□□□□ 0.52
ACTB-212ENST00000484841 FAM219BQ5XKK7 198 aa18.33■□□□□ 0.52
ACTB-212ENST00000484841 KCNA7Q96RP8 456 aa18.33■□□□□ 0.52
ACTB-212ENST00000484841 FOXC2Q99958 501 aa18.33■□□□□ 0.52
ACTB-212ENST00000484841 TUBA1CQ9BQE3 449 aa18.33■□□□□ 0.52
ACTB-212ENST00000484841 KIAA1549Q9HCM3 1950 aa18.33■□□□□ 0.52
ACTB-212ENST00000484841 DOCK7Q96N67 2140 aa18.32■□□□□ 0.52
ACTB-212ENST00000484841 PLOD3O60568 738 aa18.32■□□□□ 0.52
ACTB-212ENST00000484841 TSPAN2O60636 221 aa18.32■□□□□ 0.52
ACTB-212ENST00000484841 SLITRK5O94991 958 aa18.32■□□□□ 0.52
ACTB-212ENST00000484841 EPXP11678 715 aa18.32■□□□□ 0.52
ACTB-212ENST00000484841 DDCP20711 480 aa18.32■□□□□ 0.52
ACTB-212ENST00000484841 CHMP24386 653 aa18.32■□□□□ 0.52
ACTB-212ENST00000484841 NTSP30990 170 aa18.32■□□□□ 0.52
ACTB-212ENST00000484841 CLK3P49761 638 aaKnown RBP18.32■□□□□ 0.52
ACTB-212ENST00000484841 NCBP2P52298 156 aaKnown RBP eCLIP18.32■□□□□ 0.525e-18■■□□□ 11.9
ACTB-212ENST00000484841 SORDQ00796 357 aa18.32■□□□□ 0.52
ACTB-212ENST00000484841 GALNT18Q6P9A2 607 aa18.32■□□□□ 0.52
ACTB-212ENST00000484841 P4HA3Q7Z4N8 544 aa18.32■□□□□ 0.52
ACTB-212ENST00000484841 CDC20BQ86Y33 519 aa18.32■□□□□ 0.52
ACTB-212ENST00000484841 GRAMD2AQ8IUY3 354 aa18.32■□□□□ 0.52
ACTB-212ENST00000484841 CCDC63Q8NA47 563 aa18.32■□□□□ 0.52
ACTB-212ENST00000484841 C9orf106Q8NAJ2 232 aa18.32■□□□□ 0.52
ACTB-212ENST00000484841 OR4K17Q8NGC6 315 aa18.32■□□□□ 0.52
ACTB-212ENST00000484841 VSTM2LQ96N03 204 aa18.32■□□□□ 0.52
ACTB-212ENST00000484841 RHOXF2Q9BQY4 288 aa18.32■□□□□ 0.52
ACTB-212ENST00000484841 YIPF4Q9BSR8 244 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms