RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 ACVR1BP36896 505 aa2.26□□□□□ -2.05
SCAF11-207ENST00000484275 RPS10P46783 165 aaKnown RBP2.26□□□□□ -2.05
SCAF11-207ENST00000484275 HERV-K104P63124 156 aa2.26□□□□□ -2.05
SCAF11-207ENST00000484275 CDKL1Q00532 357 aa2.26□□□□□ -2.05
SCAF11-207ENST00000484275 BCL2L1Q07817 233 aa2.26□□□□□ -2.05
SCAF11-207ENST00000484275 GK2Q14410 553 aaPredicted RBP2.26□□□□□ -2.05
SCAF11-207ENST00000484275 MEP1BQ16820 701 aa2.26□□□□□ -2.05
SCAF11-207ENST00000484275 HKDC1Q2TB90 917 aa2.26□□□□□ -2.05
SCAF11-207ENST00000484275 PRAMEF8Q5VWM4 474 aa2.26□□□□□ -2.05
SCAF11-207ENST00000484275 KCTD11Q693B1 232 aa2.26□□□□□ -2.05
SCAF11-207ENST00000484275 TMED8Q6PL24 325 aaPredicted RBP2.26□□□□□ -2.05
SCAF11-207ENST00000484275 ATRAIDQ6UW56 229 aa2.26□□□□□ -2.05
SCAF11-207ENST00000484275 STHQ8IWL8 128 aa2.26□□□□□ -2.05
SCAF11-207ENST00000484275 NECAP2Q9NVZ3 263 aa2.26□□□□□ -2.05
SCAF11-207ENST00000484275 SLC9A8Q9Y2E8 581 aa2.26□□□□□ -2.05
SCAF11-207ENST00000484275 KLHDC2Q9Y2U9 406 aa2.26□□□□□ -2.05
SCAF11-207ENST00000484275 FAM149AA5PLN7 773 aa2.25□□□□□ -2.05
SCAF11-207ENST00000484275 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.25□□□□□ -2.05
SCAF11-207ENST00000484275 HTATSF1O43719 755 aaKnown RBP2.25□□□□□ -2.05
SCAF11-207ENST00000484275 ZNF254O75437 659 aa2.25□□□□□ -2.05
SCAF11-207ENST00000484275 CYP3A5P20815 502 aa2.25□□□□□ -2.05
SCAF11-207ENST00000484275 GABRR1P24046 479 aa2.25□□□□□ -2.05
SCAF11-207ENST00000484275 GEMP55040 296 aa2.25□□□□□ -2.05
SCAF11-207ENST00000484275 IL18R1Q13478 541 aa2.25□□□□□ -2.05
SCAF11-207ENST00000484275 LGSNQ5TDP6 509 aa2.25□□□□□ -2.05
SCAF11-207ENST00000484275 CDC42EP5Q6NZY7 148 aa2.25□□□□□ -2.05
SCAF11-207ENST00000484275 CD164L2Q6UWJ8 174 aa2.25□□□□□ -2.05
SCAF11-207ENST00000484275 HSD17B13Q7Z5P4 300 aaPredicted RBP2.25□□□□□ -2.05
SCAF11-207ENST00000484275 ADAMTSL2Q86TH1 951 aa2.25□□□□□ -2.05
SCAF11-207ENST00000484275 ZBTB44Q8NCP5 570 aa2.25□□□□□ -2.05
SCAF11-207ENST00000484275 RDH11Q8TC12 318 aa2.25□□□□□ -2.05
SCAF11-207ENST00000484275 NICN1Q9BSH3 213 aa2.25□□□□□ -2.05
SCAF11-207ENST00000484275 CACNG6Q9BXT2 260 aa2.25□□□□□ -2.05
SCAF11-207ENST00000484275 RSPO3Q9BXY4 272 aaPredicted RBP2.25□□□□□ -2.05
SCAF11-207ENST00000484275 NXF3Q9H4D5 531 aaKnown RBP2.25□□□□□ -2.05
SCAF11-207ENST00000484275 PTGES2Q9H7Z7 377 aa2.25□□□□□ -2.05
SCAF11-207ENST00000484275 DCLRE1BQ9H816 532 aa2.25□□□□□ -2.05
SCAF11-207ENST00000484275 ITM2BQ9Y287 266 aa2.25□□□□□ -2.05
SCAF11-207ENST00000484275 SYNJ2O15056 1496 aa2.25□□□□□ -2.05
SCAF11-207ENST00000484275 COL1A2P08123 1366 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 NPIPA5A0A0B4J1W7 369 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 C13orf42A0A1B0GVH6 325 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 NPIPA5E9PKD4 350 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 C11orf98E9PRG8 122 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 TIMM44O43615 452 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 TRAF3IP2O43734 574 aaPredicted RBP2.24□□□□□ -2.05
SCAF11-207ENST00000484275 H2AFZP0C0S5 128 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 GHRP10912 638 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 METAP1P53582 386 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 PUDPQ08623 228 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 BFSP1Q12934 665 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 C16orf72Q14CZ0 275 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 EXOSC7Q15024 291 aaKnown RBP2.24□□□□□ -2.05
SCAF11-207ENST00000484275 OR2B11Q5JQS5 317 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 CXCL17Q6UXB2 119 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 GALNTL5Q7Z4T8 443 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 SYCP3Q8IZU3 236 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 CLYBLQ8N0X4 340 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 OR4F17Q8NGA8 305 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 C11orf24Q96F05 449 aaPredicted RBP2.24□□□□□ -2.05
SCAF11-207ENST00000484275 OR4F4Q96R69 305 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 NAPBQ9H115 298 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 GANQ9H2C0 597 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 RNPEPL1Q9HAU8 725 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 EXOSC3Q9NQT5 275 aaKnown RBP2.24□□□□□ -2.05
SCAF11-207ENST00000484275 PNPLA3Q9NST1 481 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 CNIH4Q9P003 139 aa2.24□□□□□ -2.05
SCAF11-207ENST00000484275 ABCD4O14678 606 aa2.23□□□□□ -2.05
SCAF11-207ENST00000484275 EI24O14681 340 aa2.23□□□□□ -2.05
SCAF11-207ENST00000484275 ZNF823P16415 610 aa2.23□□□□□ -2.05
SCAF11-207ENST00000484275 SERPINH1P50454 418 aaKnown RBP2.23□□□□□ -2.05
SCAF11-207ENST00000484275 SMSP52788 366 aa2.23□□□□□ -2.05
SCAF11-207ENST00000484275 RAG2P55895 527 aa2.23□□□□□ -2.05
SCAF11-207ENST00000484275 ELAVL3Q14576 367 aaKnown RBP2.23□□□□□ -2.05
SCAF11-207ENST00000484275 PTGES3Q15185 160 aaKnown RBP2.23□□□□□ -2.05
SCAF11-207ENST00000484275 KBTBD12Q3ZCT8 623 aa2.23□□□□□ -2.05
SCAF11-207ENST00000484275 GPR157Q5UAW9 335 aa2.23□□□□□ -2.05
SCAF11-207ENST00000484275 ASRGL1Q7L266 308 aa2.23□□□□□ -2.05
SCAF11-207ENST00000484275 OR8H3Q8N146 312 aa2.23□□□□□ -2.05
SCAF11-207ENST00000484275 LYPD1Q8N2G4 141 aa2.23□□□□□ -2.05
SCAF11-207ENST00000484275 SIDT2Q8NBJ9 832 aaKnown RBP2.23□□□□□ -2.05
SCAF11-207ENST00000484275 LHX4Q969G2 390 aa2.23□□□□□ -2.05
SCAF11-207ENST00000484275 C18orf25Q96B23 403 aaPredicted RBP2.23□□□□□ -2.05
SCAF11-207ENST00000484275 DNAJA3Q96EY1 480 aa2.23□□□□□ -2.05
SCAF11-207ENST00000484275 NRTNQ99748 197 aa2.23□□□□□ -2.05
SCAF11-207ENST00000484275 VCXQ9H320 206 aa2.23□□□□□ -2.05
SCAF11-207ENST00000484275 MEPEQ9NQ76 525 aaPredicted RBP2.23□□□□□ -2.05
SCAF11-207ENST00000484275 PPIAL4AQ9Y536 164 aa2.23□□□□□ -2.05
SCAF11-207ENST00000484275 CACNG2Q9Y698 323 aa2.23□□□□□ -2.05
SCAF11-207ENST00000484275 TRBV6-6A0A0A6YYG2 114 aa2.22□□□□□ -2.05
SCAF11-207ENST00000484275 SEMG1P04279 462 aa2.22□□□□□ -2.05
SCAF11-207ENST00000484275 STIP1P31948 543 aaKnown RBP2.22□□□□□ -2.05
SCAF11-207ENST00000484275 ACADSBP45954 432 aa2.22□□□□□ -2.05
SCAF11-207ENST00000484275 GPC3P51654 580 aa2.22□□□□□ -2.05
SCAF11-207ENST00000484275 ASIC1P78348 528 aa2.22□□□□□ -2.05
SCAF11-207ENST00000484275 EGFEM1PQ0D2K5 195 aa2.22□□□□□ -2.05
SCAF11-207ENST00000484275 SMC1AQ14683 1233 aaKnown RBP2.22□□□□□ -2.05
SCAF11-207ENST00000484275 ZKSCAN8Q15776 578 aaPredicted RBP2.22□□□□□ -2.05
SCAF11-207ENST00000484275 STXBP2Q15833 593 aa2.22□□□□□ -2.05
SCAF11-207ENST00000484275 FRA10AC1Q70Z53 315 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms