RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 ZAR1LA6NP61 321 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 PTGES3LE9PB15 166 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 NUDT21O43809 227 aaKnown RBP12.36□□□□□ -0.43
CPNE1-225ENST00000483495 GABRB1P18505 474 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 ITIH1P19827 911 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 KRT20P35900 424 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 EMP3P54852 163 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 IGLV3-21P80748 117 aaPredicted RBP12.36□□□□□ -0.43
CPNE1-225ENST00000483495 MAP4K2Q12851 820 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 TCTE1Q5JU00 501 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 PGBD2Q6P3X8 592 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 VRK2Q86Y07 508 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 CLVS1Q8IUQ0 354 aaPredicted RBP12.36□□□□□ -0.43
CPNE1-225ENST00000483495 DEPDC4Q8N2C3 294 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 DEFB123Q8N688 67 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 OR52P1PQ8NH57 321 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 ZFAND2BQ8WV99 257 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 IPCEF1Q8WWN9 437 aaPredicted RBP12.36□□□□□ -0.43
CPNE1-225ENST00000483495 SIGLEC11Q96RL6 698 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 SDF2Q99470 211 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 FNDC11Q9BVV2 318 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 ZNF350Q9GZX5 532 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 SAP130Q9H0E3 1048 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 PDE7BQ9NP56 450 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 CCNB1IP1Q9NPC3 277 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 LRIT1Q9P2V4 623 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 REV1Q9UBZ9 1251 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 AASSQ9UDR5 926 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 SNX5Q9Y5X3 404 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 CCDC88CQ9P219 2028 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 HYKKA2RU49 373 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 SOX30O94993 753 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 ZBTB11O95625 1053 aaPredicted RBP12.36□□□□□ -0.43
CPNE1-225ENST00000483495 ALOX5P09917 674 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 CT62P0C5K7 136 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 POU2F1P14859 743 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 RPS4Y1P22090 263 aaKnown RBP12.36□□□□□ -0.43
CPNE1-225ENST00000483495 CHMP24386 653 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 FNTBP49356 437 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 CRISP1P54107 249 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 PIGFQ07326 219 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 ILKQ13418 452 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 COL9A2Q14055 689 aaPredicted RBP12.36□□□□□ -0.43
CPNE1-225ENST00000483495 PTGES3Q15185 160 aaKnown RBP12.36□□□□□ -0.43
CPNE1-225ENST00000483495 SMN1Q16637 294 aaKnown RBP12.36□□□□□ -0.43
CPNE1-225ENST00000483495 CD300LDQ6UXZ3 194 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 HMGN2P46Q86SG4 172 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 ZNF595Q8IYB9 648 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 SLC25A45Q8N413 288 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 MORN4Q8NDC4 146 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 OR6C4Q8NGE1 309 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 FAM81AQ8TBF8 368 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 PMM1Q92871 262 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 MUL1Q969V5 352 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 UCK2Q9BZX2 261 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 ADAP2Q9NPF8 381 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 RASSF1Q9NS23 344 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 TMEM9Q9P0T7 183 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 CDC14AQ9UNH5 594 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 WDR45Q9Y484 360 aa12.36□□□□□ -0.43
CPNE1-225ENST00000483495 ABCA7Q8IZY2 2146 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 EML5Q05BV3 1969 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 IGHV1OR21-1A0A087WYE8 117 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 A0A1B0GVT2 93 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 TRIM64BA6NI03 449 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 AGAP5A6NIR3 686 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 HRO43593 1189 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 OR10H3O60404 316 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 CTNSO60931 367 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 CBX7O95931 251 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 AK1P00568 194 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 THBS1P07996 1170 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 GIMD1P0DJR0 217 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 OSMP13725 252 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 PCSK6P29122 969 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 CTSKP43235 329 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 DUSP8Q13202 625 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 NR1D2Q14995 579 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 PODNL1Q6PEZ8 512 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 ERI1Q8IV48 349 aaKnown RBP12.35□□□□□ -0.43
CPNE1-225ENST00000483495 PEX5LQ8IYB4 626 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 FKBP10Q96AY3 582 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 LHPPQ9H008 270 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 KLHL28Q9NXS3 571 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 ZNF226Q9NYT6 803 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 SEMA5BQ9P283 1151 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 ERVK-18Q9QC07 812 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 NDOR1Q9UHB4 597 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 SLC13A4Q9UKG4 626 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 MKLN1Q9UL63 735 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 MRPS33Q9Y291 106 aaKnown RBP12.35□□□□□ -0.43
CPNE1-225ENST00000483495 ZNF443Q9Y2A4 671 aaPredicted RBP12.35□□□□□ -0.43
CPNE1-225ENST00000483495 GPR55Q9Y2T6 319 aaPredicted RBP12.35□□□□□ -0.43
CPNE1-225ENST00000483495 PCDHGA10Q9Y5H3 936 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 CLDN16Q9Y5I7 305 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 CEP192Q8TEP8 1941 aa12.35□□□□□ -0.43
CPNE1-225ENST00000483495 ENO4A6NNW6 628 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 H0YIG0 161 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 H3BMH7 237 aa12.34□□□□□ -0.43
CPNE1-225ENST00000483495 TPST2O60704 377 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms