RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 SAXO2Q658L1 398 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 REP15Q6BDI9 236 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 TNFAIP8L2Q6P589 184 aaPredicted RBP16.46■□□□□ 0.22
CPNE1-224ENST00000483359 IGFL2Q6UWQ7 119 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 DHDDSQ86SQ9 333 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 RNF130Q86XS8 419 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 CYP4Z2PQ8N1L4 340 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 ZADH2Q8N4Q0 377 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 TMBIM1Q969X1 311 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 ACTRT3Q9BYD9 372 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 TRIM8Q9BZR9 551 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 Q9N2J8 555 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 HPF1Q9NWY4 346 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 SLC25A37Q9NYZ2 338 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 VAPAQ9P0L0 249 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 LRFN1Q9P244 771 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 ATRXP46100 2492 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 A0A096LPI6 279 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 GXYLT2A0PJZ3 443 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 ALOX5P09917 674 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 COX4I1P13073 169 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 DRD5P21918 477 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 MATN1P21941 496 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 TRPC1P48995 793 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 NFYCQ13952 458 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 OR1C1Q15619 314 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 DESI1Q6ICB0 168 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 MSRB3Q8IXL7 192 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 ANKS4BQ8N8V4 417 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 FAM13CQ8NE31 585 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 ADAMTS15Q8TE58 950 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 ZFP90Q8TF47 636 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 TSPEARQ8WU66 669 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 CDS1Q92903 461 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 EFHD2Q96C19 240 aaPredicted RBP16.45■□□□□ 0.22
CPNE1-224ENST00000483359 OMA1Q96E52 524 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 NEURL3Q96EH8 262 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 RMND5BQ96G75 393 aaPredicted RBP16.45■□□□□ 0.22
CPNE1-224ENST00000483359 SLC25A18Q9H1K4 315 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 LUZP4Q9P127 313 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.45■□□□□ 0.22
CPNE1-224ENST00000483359 NPFFR2Q9Y5X5 522 aa16.45■□□□□ 0.22
CPNE1-224ENST00000483359 CNTRLQ7Z7A1 2325 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 MRASO14807 208 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 FBXW4P57775 412 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 CAPRIN1Q14444 709 aaKnown RBP16.44■□□□□ 0.22
CPNE1-224ENST00000483359 CDC73Q6P1J9 531 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 OPN5Q6U736 354 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 COX18Q8N8Q8 333 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 RCN3Q96D15 328 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 SPACA9Q96E40 222 aaPredicted RBP16.44■□□□□ 0.22
CPNE1-224ENST00000483359 HSPBAP1Q96EW2 488 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 OR7D2Q96RA2 312 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 SLC39A3Q9BRY0 314 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 HES7Q9BYE0 225 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 OR51I1Q9H343 314 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 TPT1P8Q9HAU6 139 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 CBLCQ9ULV8 474 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 KCNE3Q9Y6H6 103 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 SMG1Q96Q15 3661 aaKnown RBP16.44■□□□□ 0.22
CPNE1-224ENST00000483359 ACOX3O15254 700 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 HOXB9P17482 250 aaPredicted RBP16.44■□□□□ 0.22
CPNE1-224ENST00000483359 HLCSP50747 726 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 COX20Q5RI15 118 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.44■□□□□ 0.222e-6■■□□□ 13.7
CPNE1-224ENST00000483359 LRIF1Q5T3J3 769 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 CCNJQ5T5M9 372 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 LYPD8Q6UX82 237 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 MDGA2Q7Z553 956 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 PTRH1Q86Y79 214 aaKnown RBP16.44■□□□□ 0.22
CPNE1-224ENST00000483359 RBMXL3Q8N7X1 1067 aaKnown RBP16.44■□□□□ 0.22
CPNE1-224ENST00000483359 RP9Q8TA86 221 aaKnown RBP16.44■□□□□ 0.22
CPNE1-224ENST00000483359 HAS2Q92819 552 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 RAB8BQ92930 207 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 RNF32Q9H0A6 362 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 KLHL1Q9NR64 748 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 MAP10Q9P2G4 905 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 PCDHGB7Q9Y5F8 929 aa16.44■□□□□ 0.22
CPNE1-224ENST00000483359 IGSF10Q6WRI0 2623 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 CAPN14A8MX76 684 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 REM1O75628 298 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 NEURL1O76050 574 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 NKX2-2O95096 273 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 FBXO45P0C2W1 286 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 ZCCHC18P0CG32 403 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 TRHRP34981 398 aaPredicted RBP16.43■□□□□ 0.22
CPNE1-224ENST00000483359 KRT20P35900 424 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 MAP3K8P41279 467 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 TNFSF10P50591 281 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 NADK2Q4G0N4 442 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 ZCCHC12Q6PEW1 402 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 FIGNL1Q6PIW4 674 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 IGFL3Q6UXB1 125 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 DLEU7Q6UYE1 221 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 ZNF227Q86WZ6 799 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 SLC34A3Q8N130 599 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 FITM2Q8N6M3 262 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 HORMAD2Q8N7B1 307 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 OR10G3Q8NGC4 313 aa16.43■□□□□ 0.22
CPNE1-224ENST00000483359 SLC35A4Q96G79 324 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms