RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 SLC22A15Q8IZD6 547 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 OR52E1Q8NGJ3 308 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 OR5M9Q8NGP3 310 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 ZNF486Q96H40 463 aaPredicted RBP3.11□□□□□ -1.91
GTF3A-207ENST00000482655 CXorf58Q96LI9 332 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 USP28Q96RU2 1077 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 AGPAT1Q99943 283 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 FUNDC2Q9BWH2 189 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 PAPOLGQ9BWT3 736 aaKnown RBP3.11□□□□□ -1.91
GTF3A-207ENST00000482655 FTHL17Q9BXU8 183 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 RAB17Q9H0T7 212 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 UPF3AQ9H1J1 476 aaKnown RBP3.11□□□□□ -1.91
GTF3A-207ENST00000482655 HSD3B7Q9H2F3 369 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 RWDD1Q9H446 243 aaPredicted RBP3.11□□□□□ -1.91
GTF3A-207ENST00000482655 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.11□□□□□ -1.91
GTF3A-207ENST00000482655 DDX28Q9NUL7 540 aaKnown RBP3.11□□□□□ -1.91
GTF3A-207ENST00000482655 MED17Q9NVC6 651 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 TEX10Q9NXF1 929 aaPredicted RBP3.11□□□□□ -1.91
GTF3A-207ENST00000482655 KLK11Q9UBX7 282 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 PLA2G4CQ9UP65 541 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 OR1A2Q9Y585 309 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 MTCH2Q9Y6C9 303 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 CSNK1G3Q9Y6M4 447 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 PARP14Q460N5 1801 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 GAKO14976 1311 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 MUC6Q6W4X9 2439 aa3.11□□□□□ -1.91
GTF3A-207ENST00000482655 PRRC2BQ5JSZ5 2229 aaKnown RBP3.11□□□□□ -1.91
GTF3A-207ENST00000482655 A0A1W2PR80 420 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 INPP4BO15327 924 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 SIGLEC5O15389 551 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 KIAA0513O60268 411 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 CEACAM4O75871 244 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 CLDN1O95832 211 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 HIST1H2AGP0C0S8 130 aaPredicted RBP3.1□□□□□ -1.91
GTF3A-207ENST00000482655 IL9P15248 144 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 GATA1P15976 413 aaPredicted RBP3.1□□□□□ -1.91
GTF3A-207ENST00000482655 ACADSP16219 412 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 RPL9P32969 192 aaKnown RBP3.1□□□□□ -1.91
GTF3A-207ENST00000482655 RABIFP47224 123 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 CSRP3P50461 194 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 HERV-K104P63124 156 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 CSNK2BP67870 215 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 CYCSP99999 105 aaKnown RBP3.1□□□□□ -1.91
GTF3A-207ENST00000482655 MS4A2Q01362 244 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 DHODHQ02127 395 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 NME3Q13232 169 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 ENPP2Q13822 863 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 SNAI3Q3KNW1 292 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 GPAT3Q53EU6 434 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 C2CD6Q53TS8 623 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 CDHR3Q6ZTQ4 885 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 SH2D6Q7Z4S9 175 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.1□□□□□ -1.91
GTF3A-207ENST00000482655 ELMOD2Q8IZ81 293 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 OR9Q2Q8NGE9 314 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 C8orf46Q8TAG6 207 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 GOLGA5Q8TBA6 731 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 TCP11Q8WWU5 503 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 RSPH1Q8WYR4 309 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 HIST1H2ACQ93077 130 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 RAB39BQ96DA2 213 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 C14orf79Q96F83 325 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 C16orf45Q96MC5 204 aaPredicted RBP3.1□□□□□ -1.91
GTF3A-207ENST00000482655 NSMCE3Q96MG7 304 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 GPR137Q96N19 417 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 ERGIC2Q96RQ1 377 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 KRT12Q99456 494 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 PIGQQ9BRB3 760 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 NUSAP1Q9BXS6 441 aaKnown RBP3.1□□□□□ -1.91
GTF3A-207ENST00000482655 WWP1Q9H0M0 922 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 SLC26A1Q9H2B4 701 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 MED20Q9H944 212 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 KCNK13Q9HB14 408 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 B3GAT2Q9NPZ5 323 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 RPS10P5Q9NQ39 176 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 NLGN3Q9NZ94 848 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 EPS15L1Q9UBC2 864 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 ANGPTL3Q9Y5C1 460 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 GRIN2DO15399 1336 aa3.1□□□□□ -1.91
GTF3A-207ENST00000482655 MYO5AQ9Y4I1 1855 aaKnown RBP3.09□□□□□ -1.91
GTF3A-207ENST00000482655 ZNFX1Q9P2E3 1918 aaKnown RBP3.09□□□□□ -1.91
GTF3A-207ENST00000482655 YJEFN3A6XGL0 299 aa3.09□□□□□ -1.91
GTF3A-207ENST00000482655 LMO7DNF2Z398 122 aa3.09□□□□□ -1.91
GTF3A-207ENST00000482655 P2RX6O15547 441 aa3.09□□□□□ -1.91
GTF3A-207ENST00000482655 LRCH4O75427 683 aa3.09□□□□□ -1.91
GTF3A-207ENST00000482655 OR6B1O95007 311 aa3.09□□□□□ -1.91
GTF3A-207ENST00000482655 TRIM16O95361 564 aa3.09□□□□□ -1.91
GTF3A-207ENST00000482655 SYNGR4O95473 234 aa3.09□□□□□ -1.91
GTF3A-207ENST00000482655 PGK1P00558 417 aa3.09□□□□□ -1.91
GTF3A-207ENST00000482655 TIMP1P01033 207 aa3.09□□□□□ -1.91
GTF3A-207ENST00000482655 TGFAP01135 160 aa3.09□□□□□ -1.91
GTF3A-207ENST00000482655 CXCL10P02778 98 aa3.09□□□□□ -1.91
GTF3A-207ENST00000482655 MBL2P11226 248 aaPredicted RBP3.09□□□□□ -1.91
GTF3A-207ENST00000482655 RALAP11233 206 aa3.09□□□□□ -1.91
GTF3A-207ENST00000482655 GNSP15586 552 aa3.09□□□□□ -1.91
GTF3A-207ENST00000482655 UGT1A4P22310 534 aa3.09□□□□□ -1.91
GTF3A-207ENST00000482655 CCND2P30279 289 aa3.09□□□□□ -1.91
GTF3A-207ENST00000482655 ADORA1P30542 326 aa3.09□□□□□ -1.91
GTF3A-207ENST00000482655 OR1D2P34982 312 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms