RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 C19orf53Q9UNZ5 99 aaPredicted RBP10.88□□□□□ -0.67
HMGN1-213ENST00000482192 OR10H1Q9Y4A9 318 aa10.88□□□□□ -0.67
HMGN1-213ENST00000482192 ACTL7BQ9Y614 415 aa10.88□□□□□ -0.67
HMGN1-213ENST00000482192 ZGRF1Q86YA3 2104 aa10.88□□□□□ -0.67
HMGN1-213ENST00000482192 COL12A1Q99715 3063 aa10.88□□□□□ -0.67
HMGN1-213ENST00000482192 PRAMEF25A6NGN4 478 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 UPK1AO00322 258 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 PDPK1O15530 556 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 AKAP10O43572 662 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 TBX19O60806 448 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 WDR1O75083 606 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 ICOSLGO75144 302 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 NME6O75414 186 aaPredicted RBP10.87□□□□□ -0.67
HMGN1-213ENST00000482192 REM1O75628 298 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 TRAPPC6AO75865 159 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 SNUPNO95149 360 aaKnown RBP10.87□□□□□ -0.67
HMGN1-213ENST00000482192 ZWINTO95229 277 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 PSMG1O95456 288 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 HSPA4LO95757 839 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 HPNP05981 417 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 BCKDHAP12694 445 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 DDX5P17844 614 aaKnown RBP10.87□□□□□ -0.67
HMGN1-213ENST00000482192 GRNP28799 593 aaKnown RBP10.87□□□□□ -0.67
HMGN1-213ENST00000482192 IL12BP29460 328 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 CDK9P50750 372 aaKnown RBP10.87□□□□□ -0.67
HMGN1-213ENST00000482192 PNLIPRP2P54317 469 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 MRPS22P82650 360 aaKnown RBP10.87□□□□□ -0.67
HMGN1-213ENST00000482192 PSG6Q00889 435 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 HSPB3Q12988 150 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 PDE7AQ13946 482 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 EFR3AQ14156 821 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 ZNHIT3Q15649 155 aaPredicted RBP10.87□□□□□ -0.67
HMGN1-213ENST00000482192 ATP6AP1LQ52LC2 224 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 TNFAIP8L3Q5GJ75 292 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 DESI1Q6ICB0 168 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 ANKRD26P1Q6NSI1 321 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 ANGPTL8Q6UXH0 198 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 LRIG3Q6UXM1 1119 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 NPSR1Q6W5P4 371 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 R3HCC1LQ7Z5L2 792 aaKnown RBP10.87□□□□□ -0.67
HMGN1-213ENST00000482192 SLC44A2Q8IWA5 706 aaPredicted RBP10.87□□□□□ -0.67
HMGN1-213ENST00000482192 OR1J4Q8NGS1 313 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 CLHC1Q8NHS4 586 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 RND1Q92730 232 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 ZBED6CLQ96FA7 236 aaPredicted RBP10.87□□□□□ -0.67
HMGN1-213ENST00000482192 PKNOX2Q96KN3 472 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 GNRHR2Q96P88 292 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 ADOQ96SZ5 270 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 UBQLN3Q9H347 655 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 RUBCNLQ9H714 662 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 BAIAP2L1Q9UHR4 511 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 ZDHHC2Q9UIJ5 367 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 PCDHGB3Q9Y5G1 929 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 ICE1Q9Y2F5 2266 aa10.87□□□□□ -0.67
HMGN1-213ENST00000482192 C15orf38-AP3S2A0A0A6YYH1 394 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 WDR91A4D1P6 747 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 GNB5O14775 395 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 SNPHO15079 494 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 TSPAN2O60636 221 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 PEX11AO75192 247 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 ERLIN1O75477 346 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 SKAP2O75563 359 aaPredicted RBP10.86□□□□□ -0.67
HMGN1-213ENST00000482192 SERPINE1P05121 402 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 HOXD4P09016 255 aaPredicted RBP10.86□□□□□ -0.67
HMGN1-213ENST00000482192 DHRS4L1P0CG22 281 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 GABRA1P14867 456 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 GRK2P25098 689 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 PTPN6P29350 595 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 GPC1P35052 558 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 PTGER4P35408 488 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 HPCAL1P37235 193 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 RPL3P39023 403 aaKnown RBP10.86□□□□□ -0.67
HMGN1-213ENST00000482192 PTGDSP41222 190 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 TRPC1P48995 793 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 PMPCAQ10713 525 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 TOMM20Q15388 145 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 CDSNQ15517 529 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 CHI3L2Q15782 390 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 CYP27C1Q4G0S4 372 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 B3GNT6Q6ZMB0 384 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 LARP4Q71RC2 724 aaKnown RBP eCLIP10.86□□□□□ -0.671e-8■■■■■ 31.7
HMGN1-213ENST00000482192 ZNF551Q7Z340 670 aaPredicted RBP10.86□□□□□ -0.67
HMGN1-213ENST00000482192 RPRMLQ8N4K4 120 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 ASB5Q8WWX0 329 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 MARVELD3Q96A59 401 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 CIDECQ96AQ7 238 aaPredicted RBP10.86□□□□□ -0.67
HMGN1-213ENST00000482192 TTYH2Q9BSA4 534 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 GALNT9Q9HCQ5 603 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 Q9N2J8 555 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 ACSS1Q9NUB1 689 aaPredicted RBP10.86□□□□□ -0.67
HMGN1-213ENST00000482192 SH3BP4Q9P0V3 963 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 FAM215AQ9Y5M1 114 aa10.86□□□□□ -0.67
HMGN1-213ENST00000482192 SPTBN1Q01082 2364 aaKnown RBP10.85□□□□□ -0.67
HMGN1-213ENST00000482192 TTC36A6NLP5 189 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 FAM47E-STBD1D6RA91 191 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 SCAMP2O15127 329 aaKnown RBP10.85□□□□□ -0.67
HMGN1-213ENST00000482192 LYPLA1O75608 230 aaPredicted RBP10.85□□□□□ -0.67
HMGN1-213ENST00000482192 CBR3O75828 277 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 CHRNB4P30926 498 aa10.85□□□□□ -0.67
HMGN1-213ENST00000482192 GCKP35557 465 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms