RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 KCNA7Q96RP8 456 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 ADOQ96SZ5 270 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 CALHM2Q9HA72 323 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 RASSF1Q9NS23 344 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 CCM2LQ9NUG4 571 aaPredicted RBP13.88□□□□□ -0.19
LIMS3-203ENST00000480744 FOXD3Q9UJU5 478 aaPredicted RBP13.88□□□□□ -0.19
LIMS3-203ENST00000480744 EXO1Q9UQ84 846 aaKnown RBP13.88□□□□□ -0.19
LIMS3-203ENST00000480744 STK38LQ9Y2H1 464 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 GPR55Q9Y2T6 319 aaPredicted RBP13.88□□□□□ -0.19
LIMS3-203ENST00000480744 HRNRQ86YZ3 2850 aaPredicted RBP13.88□□□□□ -0.19
LIMS3-203ENST00000480744 PRRC2AP48634 2157 aaKnown RBP13.88□□□□□ -0.19
LIMS3-203ENST00000480744 SETD2Q9BYW2 2564 aaPredicted RBP13.87□□□□□ -0.19
LIMS3-203ENST00000480744 CCDC151A5D8V7 595 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 OR6C70A6NIJ9 312 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 A6NNC1 897 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 TO15178 435 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 RIPK2O43353 540 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 ERN1O75460 977 aaKnown RBP13.87□□□□□ -0.19
LIMS3-203ENST00000480744 ENO1P06733 434 aaKnown RBP13.87□□□□□ -0.19
LIMS3-203ENST00000480744 TMIGD3P0DMS9 266 aaPredicted RBP13.87□□□□□ -0.19
LIMS3-203ENST00000480744 IL12BP29460 328 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 TIA1P31483 386 aaKnown RBP eCLIP13.87□□□□□ -0.19
LIMS3-203ENST00000480744 OPRM1P35372 400 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 PRKAA2P54646 552 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 PKNOX1P55347 436 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 LCP2Q13094 533 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 HEPACAMQ14CZ8 416 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 SPDYAQ5MJ70 313 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 ENPP6Q6UWR7 440 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 LARP4Q71RC2 724 aaKnown RBP eCLIP13.87□□□□□ -0.19
LIMS3-203ENST00000480744 TRMT10CQ7L0Y3 403 aaKnown RBP13.87□□□□□ -0.19
LIMS3-203ENST00000480744 LCA5Q86VQ0 697 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 IFNEQ86WN2 208 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 KIF18BQ86Y91 864 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 PLCZ1Q86YW0 608 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 TRIM42Q8IWZ5 723 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 IFT20Q8IY31 132 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 SAMD14Q8IZD0 417 aaPredicted RBP13.87□□□□□ -0.19
LIMS3-203ENST00000480744 FAM9CQ8IZT9 166 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 CCNYL1Q8N7R7 359 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 BTBD9Q96Q07 612 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 BBS4Q96RK4 519 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 TUBA1CQ9BQE3 449 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 TXLNGYQ9BZA5 131 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 OR2B2Q9GZK3 357 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 ANKZF1Q9H8Y5 726 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 FOLH1BQ9HBA9 442 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 TAS2R10Q9NYW0 307 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 FETUBQ9UGM5 382 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 TBK1Q9UHD2 729 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 ST6GALNAC2Q9UJ37 374 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 DKKL1Q9UK85 242 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 CBLCQ9ULV8 474 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 PLEKHA6Q9Y2H5 1048 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 WIF1Q9Y5W5 379 aa13.87□□□□□ -0.19
LIMS3-203ENST00000480744 TUBAL3A6NHL2 446 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 DIAPH2O60879 1101 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 ABCB7O75027 752 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 ANXA4P09525 319 aaPredicted RBP13.86□□□□□ -0.19
LIMS3-203ENST00000480744 PYGBP11216 843 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 DNASE1P24855 282 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 SLCO1A2P46721 670 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 STARP49675 285 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 ZNF155Q12901 538 aaPredicted RBP13.86□□□□□ -0.19
LIMS3-203ENST00000480744 EFR3AQ14156 821 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 CEBPEQ15744 281 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 OR5M10Q6IEU7 315 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 PLXDC2Q6UX71 529 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 NPSR1Q6W5P4 371 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 CDC20BQ86Y33 519 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 SLC44A2Q8IWA5 706 aaPredicted RBP13.86□□□□□ -0.19
LIMS3-203ENST00000480744 LINC01560Q8TB33 94 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 ZPLD1Q8TCW7 415 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 NINJ1Q92982 152 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 EFHD2Q96C19 240 aaPredicted RBP13.86□□□□□ -0.19
LIMS3-203ENST00000480744 ERP27Q96DN0 273 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 L3HYPDHQ96EM0 354 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 SLC35A4Q96G79 324 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 SFXN2Q96NB2 322 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 MID1IP1Q9NPA3 183 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 SLC35C2Q9NQQ7 365 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 PSMC3IPQ9P2W1 217 aaPredicted RBP13.86□□□□□ -0.19
LIMS3-203ENST00000480744 FBXL2Q9UKC9 423 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 OR10H1Q9Y4A9 318 aa13.86□□□□□ -0.19
LIMS3-203ENST00000480744 ABCA4P78363 2273 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 PCNX3Q9H6A9 2034 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 CLCA1A8K7I4 914 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 GSTA1P08263 222 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 CT45A8P0DMV1 189 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 CT45A9P0DMV2 189 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 CPN1P15169 458 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 SRD5A2P31213 254 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 MPIP34949 423 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 CPA2P48052 419 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 C2orf80Q0P641 193 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 FOXF2Q12947 444 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 IMPG1Q17R60 797 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 CT45A2Q5DJT8 189 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 SH2D4BQ5SQS7 431 aa13.85□□□□□ -0.19
LIMS3-203ENST00000480744 OR7G2Q8NG99 324 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms