RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 GSAPA4D1B5 854 aa23.11■■□□□ 1.29
SYNGAP1-206ENST00000479510 IDH3BO43837 385 aa23.11■■□□□ 1.29
SYNGAP1-206ENST00000479510 PCDH8O95206 1070 aa23.11■■□□□ 1.29
SYNGAP1-206ENST00000479510 FPR3P25089 353 aa23.11■■□□□ 1.29
SYNGAP1-206ENST00000479510 PPP3R1P63098 170 aa23.11■■□□□ 1.29
SYNGAP1-206ENST00000479510 CAMK1Q14012 370 aa23.11■■□□□ 1.29
SYNGAP1-206ENST00000479510 SF3B4Q15427 424 aaKnown RBP eCLIP23.11■■□□□ 1.29
SYNGAP1-206ENST00000479510 DECR1Q16698 335 aa23.11■■□□□ 1.29
SYNGAP1-206ENST00000479510 ZNF628Q5EBL2 1059 aa23.11■■□□□ 1.29
SYNGAP1-206ENST00000479510 CCDC116Q8IYX3 515 aa23.11■■□□□ 1.29
SYNGAP1-206ENST00000479510 CAPSLQ8WWF8 208 aa23.11■■□□□ 1.29
SYNGAP1-206ENST00000479510 SLC9A6Q92581 669 aa23.11■■□□□ 1.29
SYNGAP1-206ENST00000479510 PHOX2BQ99453 314 aa23.11■■□□□ 1.29
SYNGAP1-206ENST00000479510 KATNB1Q9BVA0 655 aa23.11■■□□□ 1.29
SYNGAP1-206ENST00000479510 TP63Q9H3D4 680 aaPredicted RBP23.11■■□□□ 1.29
SYNGAP1-206ENST00000479510 TIGARQ9NQ88 270 aa23.11■■□□□ 1.29
SYNGAP1-206ENST00000479510 LYARQ9NX58 379 aaKnown RBP23.11■■□□□ 1.29
SYNGAP1-206ENST00000479510 PDE4DIPQ5VU43 2346 aa23.11■■□□□ 1.29
SYNGAP1-206ENST00000479510 PRR19A6NJB7 356 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 GLOD5A6NK44 160 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 POLR1CO15160 346 aaPredicted RBP23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 LIMS3P0CW19 117 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 LIMS4P0CW20 117 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 OMPP47874 163 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 RPS25P62851 125 aaKnown RBP23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 CRTC2Q53ET0 693 aaPredicted RBP23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 METAP1DQ6UB28 335 aaPredicted RBP23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 RRM2BQ7LG56 351 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 PRICKLE2Q7Z3G6 844 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 OR8D4Q8NGM9 314 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 YIPF4Q9BSR8 244 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 SLC6A20Q9NP91 592 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 MBNL1Q9NR56 388 aaKnown RBP23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 IMP3Q9NV31 184 aaKnown RBP23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 RBMX2Q9Y388 322 aaKnown RBP23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 N6AMT1Q9Y5N5 214 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 NKX2-5P52952 324 aaPredicted RBP23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 LSM11P83369 360 aaKnown RBP eCLIP23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 DSG2Q14126 1118 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 OR2G6Q5TZ20 316 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 TMEM107Q6UX40 140 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 OLIG3Q7RTU3 272 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 RDH10Q8IZV5 341 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 MFSD9Q8NBP5 474 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 ACOT11Q8WXI4 607 aaPredicted RBP23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 GATAD2BQ8WXI9 593 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 TMEM203Q969S6 136 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 ELP4Q96EB1 424 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 C16orf58Q96GQ5 468 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 JAM3Q9BX67 310 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 OSGEPL1Q9H4B0 414 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 XKR8Q9H6D3 395 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 HEATR5BQ9P2D3 2071 aa23.1■■□□□ 1.29
SYNGAP1-206ENST00000479510 MEIOCA2RUB1 952 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 WASHC1A8K0Z3 465 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 A8MU76 341 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 C5orf67F2Z3F1 127 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 CHST10O43529 356 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 TMCC2O75069 709 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 PRKRAO75569 313 aaKnown RBP23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 CSF3P09919 207 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 AZGP1P25311 298 aaKnown RBP23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 KRT33BQ14525 404 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 IRF4Q15306 451 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 SLC35F1Q5T1Q4 408 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 WASH2PQ6VEQ5 465 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 NUP43Q8NFH3 380 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 PAWRQ96IZ0 340 aaKnown RBP23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 ACTRT3Q9BYD9 372 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 BTBD1Q9H0C5 482 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 IL20Q9NYY1 176 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 OR1A2Q9Y585 309 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 CCDC182A6NF36 153 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 C4orf51C9J302 202 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 FAM47E-STBD1D6RA91 191 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 PROM1O43490 865 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 HCN1O60741 890 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 AGR2O95994 175 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 CLEC2LP0C7M8 214 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 CCNYL3P0C7X3 344 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 TGM4P49221 684 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 AADACL4Q5VUY2 407 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 OR2L3Q8NG85 312 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 CHFRQ96EP1 664 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 OTUB1Q96FW1 271 aaPredicted RBP23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 ST6GAL2Q96JF0 529 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 ZNF681Q96N22 645 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 RSPH9Q9H1X1 276 aaPredicted RBP23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 SEMA4GQ9NTN9 838 aa23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 EXOGQ9Y2C4 368 aaKnown RBP23.09■■□□□ 1.29
SYNGAP1-206ENST00000479510 DUXAA6NLW8 204 aa23.08■■□□□ 1.29
SYNGAP1-206ENST00000479510 OR5F1O95221 314 aa23.08■■□□□ 1.29
SYNGAP1-206ENST00000479510 GALP22466 123 aa23.08■■□□□ 1.29
SYNGAP1-206ENST00000479510 CFL1P23528 166 aaKnown RBP23.08■■□□□ 1.29
SYNGAP1-206ENST00000479510 CDH11P55287 796 aa23.08■■□□□ 1.29
SYNGAP1-206ENST00000479510 STXBP1P61764 594 aaKnown RBP23.08■■□□□ 1.29
SYNGAP1-206ENST00000479510 CHRNEQ04844 493 aa23.08■■□□□ 1.29
SYNGAP1-206ENST00000479510 DUSP2Q05923 314 aa23.08■■□□□ 1.29
SYNGAP1-206ENST00000479510 CST6Q15828 149 aa23.08■■□□□ 1.29
SYNGAP1-206ENST00000479510 ZFP69Q49AA0 526 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms