RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 SLC6A5Q9Y345 797 aa12.42□□□□□ -0.42
CNKSR3-204ENST00000479339 SNX10Q9Y5X0 201 aa12.42□□□□□ -0.42
CNKSR3-204ENST00000479339 DNMT3AQ9Y6K1 912 aaPredicted RBP12.42□□□□□ -0.42
CNKSR3-204ENST00000479339 ZNF840PA6NDX5 716 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 AGRPO00253 132 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 SLC28A2O43868 658 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 ULK1O75385 1050 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 APOC3P02656 99 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 HRGP04196 525 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 TCRBP04435 133 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 CKMP06732 381 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 TDGF1P13385 188 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 ACPPP15309 386 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 PPIBP23284 216 aaKnown RBP12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 CNR2P34972 360 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 PCGF2P35227 344 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 PIK3CGP48736 1102 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 VSX2P58304 361 aaPredicted RBP12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 RPS7P62081 194 aaKnown RBP12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 Q3ZCU0 254 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 NLRC3Q7RTR2 1065 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 KANSL1Q7Z3B3 1105 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 ZER1Q7Z7L7 766 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 TMIEQ8NEW7 156 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 MOSPD2Q8NHP6 518 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 OVCA2Q8WZ82 227 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 ESAMQ96AP7 390 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 MED10Q9BTT4 135 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 TMPRSS13Q9BYE2 586 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 ULBP1Q9BZM6 244 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 NKX6-2Q9C056 277 aaPredicted RBP12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 IPPKQ9H8X2 491 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 TMEM184CQ9NVA4 438 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 ZSCAN32Q9NX65 697 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 SPATA2Q9UM82 520 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 SNX11Q9Y5W9 270 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 GREB1Q4ZG55 1949 aa12.41□□□□□ -0.42
CNKSR3-204ENST00000479339 TRAV6A0A075B6T7 132 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 TRDV1A0A1B0GX56 115 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 TMEM82A0PJX8 343 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 IRGMA1A4Y4 181 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 ANKDD1BA6NHY2 528 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 L7N2F9 121 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 RAB36O95755 333 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 CBX7O95931 251 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 FGF1P05230 155 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 TYRP14679 529 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 HLA-DPA1P20036 260 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 AHCYP23526 432 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 RBMS1P29558 406 aaKnown RBP12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 CD86P42081 329 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 AVPR1BP47901 424 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 HNMTP50135 292 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 CDH12P55289 794 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 SLC7A9P82251 487 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 RBBP4Q09028 425 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 TAF10Q12962 218 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 OCLNQ16625 522 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 HFEQ30201 348 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 CRTC2Q53ET0 693 aaPredicted RBP12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 IFI44LQ53G44 452 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 PDZD9Q8IXQ8 264 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 SPPL2AQ8TCT8 520 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 C1GALT1C1Q96EU7 318 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 LINGO1Q96FE5 620 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 LRRC46Q96FV0 321 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 SMARCD1Q96GM5 515 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 YIPF4Q9BSR8 244 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 THAP7Q9BT49 309 aaPredicted RBP12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 FAM126AQ9BYI3 521 aaPredicted RBP12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 EDARQ9UNE0 448 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 SF3B6Q9Y3B4 125 aaKnown RBP12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 SPIN1Q9Y657 262 aaPredicted RBP12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 COMMD10Q9Y6G5 202 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 YJEFN3A6XGL0 299 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 MAGEB17A8MXT2 336 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 G3V3Q6 166 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 TNFRSF10BO14763 440 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 SMAD6O43541 496 aaKnown RBP12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 SSNA1O43805 119 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 NDUFS3O75489 264 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 S100A8P05109 93 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 HIST1H2AGP0C0S8 130 aaPredicted RBP12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 ATXN1LP0C7T5 689 aaKnown RBP12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 NR2F6P10588 404 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 HIST1H2ADP20671 130 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 WNT4P56705 351 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 SELENOWP63302 87 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 MADCAM1Q13477 382 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 CCINQ13939 588 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 GAS6Q14393 721 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 GSG1Q2KHT4 349 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 HIST2H2AA3Q6FI13 130 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 ATRAIDQ6UW56 229 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 CLEC20AQ6ZU45 233 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 PRICKLE2Q7Z3G6 844 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 LRRC28Q86X40 367 aaPredicted RBP12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 SPEM1Q8N4L4 309 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 SLC5A11Q8WWX8 675 aa12.4□□□□□ -0.42
CNKSR3-204ENST00000479339 TCEAL3Q969E4 200 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms