RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 TCF7L2Q9NQB0 619 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 SACM1LQ9NTJ5 587 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 ZCCHC3Q9NUD5 404 aaKnown RBP9.45□□□□□ -0.9
HDAC6-222ENST00000478095 DCTN4Q9UJW0 460 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 OR10H1Q9Y4A9 318 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 CHCHD2Q9Y6H1 151 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-222ENST00000478095 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 ASPDHA6ND91 283 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 FAM166BA8MTA8 275 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 NPIPA5E9PKD4 350 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 KLRC4-KLRK1H3BQV0 150 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 TO15178 435 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 ACOX3O15254 700 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 EMC8O43402 210 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 UGT2B11O75310 529 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 REM1O75628 298 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 PPM1BO75688 479 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 TGDSO95455 350 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 CPSF4O95639 269 aaKnown RBP9.44□□□□□ -0.9
HDAC6-222ENST00000478095 CRYABP02511 175 aaKnown RBP9.44□□□□□ -0.9
HDAC6-222ENST00000478095 ZNF24P17028 368 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 CNR1P21554 472 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 S100A3P33764 101 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 RFX3P48380 749 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 DCAF7P61962 342 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 KCNJ2P63252 427 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 HBA1P69905 142 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 PHC1P78364 1004 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 ALDH6A1Q02252 535 aaKnown RBP9.44□□□□□ -0.9
HDAC6-222ENST00000478095 TP53BP2Q13625 1128 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 MLC1Q15049 377 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 ZNHIT3Q15649 155 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-222ENST00000478095 TUSC1Q2TAM9 212 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 PDCD4Q53EL6 469 aaKnown RBP9.44□□□□□ -0.9
HDAC6-222ENST00000478095 RNFT1Q5M7Z0 435 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 SLC22A10Q63ZE4 541 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 ZNF324BQ6AW86 544 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-222ENST00000478095 PAOXQ6QHF9 649 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 GALNT10Q86SR1 603 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 ATCAYQ86WG3 371 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 SLC34A3Q8N130 599 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 OR2M7Q8NG81 312 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 OR4A15Q8NGL6 344 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 OR9I1Q8NGQ6 314 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 NR4A3Q92570 626 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 SLC9A6Q92581 669 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 JADE3Q92613 823 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 DIO2Q92813 273 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 TESCQ96BS2 214 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 EFHD2Q96C19 240 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-222ENST00000478095 HSPBAP1Q96EW2 488 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 GIMAP5Q96F15 307 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 C16orf58Q96GQ5 468 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 JSRP1Q96MG2 331 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-222ENST00000478095 ZBTB18Q99592 522 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 BARD1Q99728 777 aaKnown RBP9.44□□□□□ -0.9
HDAC6-222ENST00000478095 SLX1AQ9BQ83 275 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 C3orf14Q9HBI5 128 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 Q9N2J8 555 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 SH2D2AQ9NP31 389 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 FGFR1OP2Q9NVK5 253 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 CNOT11Q9UKZ1 510 aaKnown RBP9.44□□□□□ -0.9
HDAC6-222ENST00000478095 NPIPA1Q9UND3 350 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 MAPRE3Q9UPY8 281 aa9.44□□□□□ -0.9
HDAC6-222ENST00000478095 A0A0G2JND7 137 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 GXYLT2A0PJZ3 443 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 CAPN14A8MX76 684 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 RNASET2O00584 256 aaKnown RBP9.43□□□□□ -0.9
HDAC6-222ENST00000478095 TP53I11O14683 189 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 TFECO14948 347 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-222ENST00000478095 ZNHIT1O43257 154 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 HS6ST1O60243 411 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 SCN2BO60939 215 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 SLC22A3O75751 556 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 WISP1O95388 367 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 HMGN2P05204 90 aaKnown RBP9.43□□□□□ -0.9
HDAC6-222ENST00000478095 VIMP08670 466 aaKnown RBP9.43□□□□□ -0.9
HDAC6-222ENST00000478095 IFI6P09912 130 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 ACP2P11117 423 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 IL12BP29460 328 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 GABRA3P34903 492 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 KRT20P35900 424 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 CCT3P49368 545 aaKnown RBP9.43□□□□□ -0.9
HDAC6-222ENST00000478095 TDGF1P3P51864 188 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 KCNK10P57789 538 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 PRR5P85299 388 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 PLGLB1Q02325 96 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 GAB1Q13480 694 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 LASP1Q14847 261 aaKnown RBP9.43□□□□□ -0.9
HDAC6-222ENST00000478095 GSTA3Q16772 222 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 MFSD12Q6NUT3 480 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 GK5Q6ZS86 529 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 DND1Q8IYX4 353 aaKnown RBP9.43□□□□□ -0.9
HDAC6-222ENST00000478095 MIER2Q8N344 545 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 FBXW8Q8N3Y1 598 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 NATD1Q8N6N6 113 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 ZFP62Q8NB50 900 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-222ENST00000478095 GALNT11Q8NCW6 608 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 OR8J2Q8NGG1 315 aa9.43□□□□□ -0.9
HDAC6-222ENST00000478095 DNAJB8Q8NHS0 232 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms