RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 PRAMEF25A6NGN4 478 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 AHRRA9YTQ3 701 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 FAM47E-STBD1D6RA91 191 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 PLOD2O00469 737 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 NME6O75414 186 aaPredicted RBP12.61□□□□□ -0.39
HDAC7-222ENST00000477937 CBR3O75828 277 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 PTPN6P29350 595 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 PTGDSP41222 190 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 PNLIPRP2P54317 469 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 CORO7P57737 925 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 EFR3AQ14156 821 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 ARL13AQ5H913 290 aaPredicted RBP12.61□□□□□ -0.39
HDAC7-222ENST00000477937 KANK2Q63ZY3 851 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 SLC44A2Q8IWA5 706 aaPredicted RBP12.61□□□□□ -0.39
HDAC7-222ENST00000477937 DDIASQ8IXT1 998 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 PM20D2Q8IYS1 436 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 ULK2Q8IYT8 1036 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 CLYBLQ8N0X4 340 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 SLC35A4Q96G79 324 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 ADOQ96SZ5 270 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 SPOCK3Q9BQ16 436 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 TMEM109Q9BVC6 243 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 PARD6BQ9BYG5 372 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 UCK2Q9BZX2 261 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 GALNT9Q9HCQ5 603 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 C19orf53Q9UNZ5 99 aaPredicted RBP12.61□□□□□ -0.39
HDAC7-222ENST00000477937 EXO1Q9UQ84 846 aaKnown RBP12.61□□□□□ -0.39
HDAC7-222ENST00000477937 TMED5Q9Y3A6 229 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 OR10H1Q9Y4A9 318 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 TRAF6Q9Y4K3 522 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 DNAJC15Q9Y5T4 150 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 TEX15Q9BXT5 2789 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 NOTCH2Q04721 2471 aa12.61□□□□□ -0.39
HDAC7-222ENST00000477937 NKX2-6A6NCS4 301 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 FAM90A27PA6NNH2 459 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 SNPHO15079 494 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 LSM1O15116 133 aaKnown RBP12.6□□□□□ -0.39
HDAC7-222ENST00000477937 TSPAN2O60636 221 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 CHRNGP07510 517 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 TACR1P25103 407 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 SERPINB5P36952 375 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 MC3RP41968 323 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 ZFP36L2P47974 494 aaKnown RBP12.6□□□□□ -0.39
HDAC7-222ENST00000477937 MRPS22P82650 360 aaKnown RBP12.6□□□□□ -0.39
HDAC7-222ENST00000477937 PSG6Q00889 435 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 CRYZQ08257 329 aaKnown RBP12.6□□□□□ -0.39
HDAC7-222ENST00000477937 ZNF155Q12901 538 aaPredicted RBP12.6□□□□□ -0.39
HDAC7-222ENST00000477937 SF3B4Q15427 424 aaKnown RBP eCLIP12.6□□□□□ -0.394e-9■■■□□ 17
HDAC7-222ENST00000477937 GALNTL6Q49A17 601 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 RFTN2Q52LD8 501 aaPredicted RBP12.6□□□□□ -0.39
HDAC7-222ENST00000477937 EIPR1Q53HC9 387 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 WIPI1Q5MNZ9 446 aaPredicted RBP12.6□□□□□ -0.39
HDAC7-222ENST00000477937 TMEM107Q6UX40 140 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 NPSR1Q6W5P4 371 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 MEX3BQ6ZN04 569 aaKnown RBP12.6□□□□□ -0.39
HDAC7-222ENST00000477937 LARP4Q71RC2 724 aaKnown RBP eCLIP12.6□□□□□ -0.39
HDAC7-222ENST00000477937 MREGQ8N565 214 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 OR2T11Q8NH01 316 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 TWIST2Q8WVJ9 160 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 GFM2Q969S9 779 aaKnown RBP12.6□□□□□ -0.39
HDAC7-222ENST00000477937 ELP4Q96EB1 424 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 DTNBP1Q96EV8 351 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 AMDHD1Q96NU7 426 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 TIMP4Q99727 224 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 CCT7Q99832 543 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 ENKD1Q9H0I2 346 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 TUBB1Q9H4B7 451 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 DDX18Q9NVP1 670 aaKnown RBP12.6□□□□□ -0.39
HDAC7-222ENST00000477937 MAPRE3Q9UPY8 281 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 SLC6A5Q9Y345 797 aa12.6□□□□□ -0.39
HDAC7-222ENST00000477937 PCNX3Q9H6A9 2034 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 A0A0G2JNJ9 132 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 UPK1AO00322 258 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 TOXO94900 526 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 CREB1P16220 341 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 SDC1P18827 310 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 GCKP35557 465 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 RPL38P63173 70 aaKnown RBP12.59□□□□□ -0.39
HDAC7-222ENST00000477937 ZNHIT3Q15649 155 aaPredicted RBP12.59□□□□□ -0.39
HDAC7-222ENST00000477937 UGT3A2Q3SY77 523 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 KRT71Q3SY84 523 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 CYP27C1Q4G0S4 372 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 NHSL2Q5HYW2 709 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 SH2D4BQ5SQS7 431 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 RIPPLY2Q5TAB7 128 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 VASNQ6EMK4 673 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 ZCCHC23Q6ZST2 131 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 OR2L13Q8N349 312 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 WDSUB1Q8N9V3 476 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 ACBD4Q8NC06 268 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 FAM83FQ8NEG4 500 aaPredicted RBP12.59□□□□□ -0.39
HDAC7-222ENST00000477937 OR4N2Q8NGD1 307 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 ABTB1Q969K4 478 aaPredicted RBP12.59□□□□□ -0.39
HDAC7-222ENST00000477937 ZNF764Q96H86 408 aaPredicted RBP12.59□□□□□ -0.39
HDAC7-222ENST00000477937 FCRL1Q96LA6 429 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 TSSK3Q96PN8 268 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 TRIM8Q9BZR9 551 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 REEP4Q9H6H4 257 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 SH3BP4Q9P0V3 963 aa12.59□□□□□ -0.39
HDAC7-222ENST00000477937 Q9UFV3 132 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms