RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 K7ERQ8 282 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 RNF103O00237 685 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 CUBNO60494 3623 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 ZNF821O75541 412 aaPredicted RBP4.08□□□□□ -1.76
VPS50-214ENST00000477935 LY6G6DO95868 133 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 MOCS2O96007 188 aaPredicted RBP4.08□□□□□ -1.76
VPS50-214ENST00000477935 GNB3P16520 340 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 TRIM23P36406 574 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 SPAM1P38567 509 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 DNA2P51530 1060 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 CCNHP51946 323 aaPredicted RBP4.08□□□□□ -1.76
VPS50-214ENST00000477935 CDH4P55283 916 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 RAD51Q06609 339 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 ADIGQ0VDE8 80 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 BST2Q10589 180 aaKnown RBP4.08□□□□□ -1.76
VPS50-214ENST00000477935 KRT33BQ14525 404 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 CEBPEQ15744 281 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 KYNUQ16719 465 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 TMEM52BQ4KMG9 183 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 FAM98BQ52LJ0 330 aaKnown RBP4.08□□□□□ -1.76
VPS50-214ENST00000477935 ALS2CLQ60I27 953 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 FBXL22Q6P050 247 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 C22orf39Q6P5X5 142 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 INTS8Q75QN2 995 aaKnown RBP4.08□□□□□ -1.76
VPS50-214ENST00000477935 SZRD1Q7Z422 152 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 SETD3Q86TU7 594 aaPredicted RBP4.08□□□□□ -1.76
VPS50-214ENST00000477935 RAB43Q86YS6 212 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 PLD3Q8IV08 490 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 DCAF4L2Q8NA75 395 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 AVL9Q8NBF6 648 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 C1orf131Q8NDD1 294 aaKnown RBP4.08□□□□□ -1.76
VPS50-214ENST00000477935 CCL4L1Q8NHW4 92 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 TMEM190Q8WZ59 177 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 OR1E3Q8WZA6 343 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 DAZLQ92904 295 aaKnown RBP4.08□□□□□ -1.76
VPS50-214ENST00000477935 SAT2Q96F10 170 aaPredicted RBP4.08□□□□□ -1.76
VPS50-214ENST00000477935 LRR1Q96L50 414 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 C9orf72Q96LT7 481 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 RPRD1AQ96P16 312 aaPredicted RBP4.08□□□□□ -1.76
VPS50-214ENST00000477935 PRMT1Q99873 361 aaKnown RBP4.08□□□□□ -1.76
VPS50-214ENST00000477935 ZNF559Q9BR84 538 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 RHNO1Q9BSD3 238 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 NLNQ9BYT8 704 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 FGF22Q9HCT0 170 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 HAUS2Q9NVX0 235 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 KIAA1257Q9ULG3 409 aa4.08□□□□□ -1.76
VPS50-214ENST00000477935 AKAP6Q13023 2319 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 MAGEB17A8MXT2 336 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 TO15178 435 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 ZWINTO95229 277 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 C9P02748 559 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 ACP2P11117 423 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 CCR1P32246 355 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 LONP1P36776 959 aaKnown RBP4.07□□□□□ -1.76
VPS50-214ENST00000477935 SERPINH1P50454 418 aaKnown RBP4.07□□□□□ -1.76
VPS50-214ENST00000477935 GSDMDP57764 484 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 RPS18P62269 152 aaKnown RBP4.07□□□□□ -1.76
VPS50-214ENST00000477935 SNRPD1P62314 119 aaKnown RBP4.07□□□□□ -1.76
VPS50-214ENST00000477935 PMP22Q01453 160 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 PLA2G7Q13093 441 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 INAQ16352 499 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 KIAA1644Q3SXP7 199 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 C14orf177Q52M58 125 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.07□□□□□ -1.76
VPS50-214ENST00000477935 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
VPS50-214ENST00000477935 IGFL2Q6UWQ7 119 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 NOTCH2NLQ7Z3S9 236 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 C12orf56Q8IXR9 622 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 CCDC65Q8IXS2 484 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 EID3Q8N140 333 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 GUF1Q8N442 669 aaKnown RBP4.07□□□□□ -1.76
VPS50-214ENST00000477935 SFRP1Q8N474 314 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 ANKRD20A12PQ8NF67 263 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 GOLGA5Q8TBA6 731 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 DQX1Q8TE96 717 aaKnown RBP4.07□□□□□ -1.76
VPS50-214ENST00000477935 CA5BP1Q8WTZ4 195 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 MR1Q95460 341 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 DNAJC19Q96DA6 116 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 FAM120BQ96EK7 910 aaKnown RBP4.07□□□□□ -1.76
VPS50-214ENST00000477935 HSFY1Q96LI6 401 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 FAM81BQ96LP2 452 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 MAK16Q9BXY0 300 aaKnown RBP4.07□□□□□ -1.76
VPS50-214ENST00000477935 RTN4RQ9BZR6 473 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 PPIL3Q9H2H8 161 aaKnown RBP4.07□□□□□ -1.76
VPS50-214ENST00000477935 HHATLQ9HCP6 504 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 SIX2Q9NPC8 291 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 AGPAT3Q9NRZ7 376 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 PANK4Q9NVE7 773 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 COQ3Q9NZJ6 369 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 NPAP1Q9NZP6 1156 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 MOSPD1Q9UJG1 213 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 RARRES3Q9UL19 164 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 ITM2BQ9Y287 266 aa4.07□□□□□ -1.76
VPS50-214ENST00000477935 SPIN1Q9Y657 262 aaPredicted RBP4.07□□□□□ -1.76
VPS50-214ENST00000477935 MDC1Q14676 2089 aaKnown RBP4.06□□□□□ -1.76
VPS50-214ENST00000477935 PRSS51A0A1B0GVH4 220 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 ILVBLA1L0T0 632 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 TLCD2A6NGC4 264 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 OR6C76A6NM76 312 aa4.06□□□□□ -1.76
VPS50-214ENST00000477935 OR5K4A6NMS3 321 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms