RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 CUTCQ9NTM9 273 aa11.27□□□□□ -0.6
PRPF39-203ENST00000477626 ENTPD4Q9Y227 616 aa11.27□□□□□ -0.6
PRPF39-203ENST00000477626 DCHS1Q96JQ0 3298 aa11.27□□□□□ -0.6
PRPF39-203ENST00000477626 FAM86C2PA6NEL3 165 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 UGT2B17O75795 530 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 DKK1O94907 266 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 HTR2AP28223 471 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 PPP2R1BP30154 601 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 LIMK1P53667 647 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 SLC37A1P57057 533 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 PRAMEF17Q5VTA0 474 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 ZNF836Q6ZNA1 936 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 GRAMD2AQ8IUY3 354 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 CLIP4Q8N3C7 705 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 OR51Q1Q8NH59 317 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 CEP76Q8TAP6 659 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 PPWD1Q96BP3 646 aaKnown RBP11.27□□□□□ -0.61
PRPF39-203ENST00000477626 OTUB1Q96FW1 271 aaPredicted RBP11.27□□□□□ -0.61
PRPF39-203ENST00000477626 ZNF578Q96N58 590 aaPredicted RBP11.27□□□□□ -0.61
PRPF39-203ENST00000477626 BBS4Q96RK4 519 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 SLC26A1Q9H2B4 701 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 ANKHQ9HCJ1 492 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 ZNF223Q9UK11 482 aaPredicted RBP11.27□□□□□ -0.61
PRPF39-203ENST00000477626 PCDHGB3Q9Y5G1 929 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 NINQ8N4C6 2090 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 FRYQ5TBA9 3013 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 A0A1W2PQ72 361 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 B4DXG7 233 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 ZNF23P17027 643 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 EXOC3L2Q2M3D2 409 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 GTF2IRD2BQ6EKJ0 949 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 RHBDD2Q6NTF9 364 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 GTF2IRD2Q86UP8 949 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 OR2I1PQ8NGU4 316 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 LOXL4Q96JB6 756 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 CNBD2Q96M20 576 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 SPRY4Q9C004 299 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 SEMA4CQ9C0C4 833 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 GIMAP4Q9NUV9 329 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 SLC6A14Q9UN76 642 aa11.27□□□□□ -0.61
PRPF39-203ENST00000477626 OR2W5A6NFC9 320 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 RHPN2P1A8MT19 583 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 BMP10O95393 424 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 STAMBPO95630 424 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 RNH1P13489 461 aaKnown RBP11.26□□□□□ -0.61
PRPF39-203ENST00000477626 DRD5P21918 477 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 CRHBPP24387 322 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 AVPR2P30518 371 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 MAPK10P53779 464 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 TEKQ02763 1124 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 TP53BP2Q13625 1128 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 ZNF141Q15928 474 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 NFAM1Q8NET5 270 aaPredicted RBP11.26□□□□□ -0.61
PRPF39-203ENST00000477626 NMNAT1Q9HAN9 279 aaPredicted RBP11.26□□□□□ -0.61
PRPF39-203ENST00000477626 EXD2Q9NVH0 621 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 TUBA8Q9NY65 449 aaPredicted RBP11.26□□□□□ -0.61
PRPF39-203ENST00000477626 HCN3Q9P1Z3 774 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 HSPE1-MOB4S4R3N1 261 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 PTPRBP23467 1997 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 HEATR5AQ86XA9 2040 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 SH3PXD2BA1X283 911 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 MAOAP21397 527 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 DHPSP49366 369 aaPredicted RBP11.26□□□□□ -0.61
PRPF39-203ENST00000477626 TUBA4AP68366 448 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 BORAQ6PGQ7 559 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 BHLHB9Q6PI77 547 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 SLC5A8Q8N695 610 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 ZNF321PQ8N8H1 164 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 YTHDF1Q9BYJ9 559 aaKnown RBP11.26□□□□□ -0.61
PRPF39-203ENST00000477626 ZNF443Q9Y2A4 671 aaPredicted RBP11.26□□□□□ -0.61
PRPF39-203ENST00000477626 PCDHGB1Q9Y5G3 927 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 PCDHGA10Q9Y5H3 936 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 LOC100130705A0A1B0GUX0 176 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 TMEM200CA6NKL6 621 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 CDX4O14627 284 aaPredicted RBP11.26□□□□□ -0.61
PRPF39-203ENST00000477626 KCNK2O95069 426 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 GNSP15586 552 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 CRISP3P54108 245 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 ID2Q02363 134 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 DOC2BQ14184 412 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 GRM7Q14831 915 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 FAM214AQ32MH5 1076 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 LCN10Q6JVE6 187 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 TMEM154Q6P9G4 183 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 KLHL17Q6TDP4 642 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 VRK2Q86Y07 508 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 SGCDQ92629 289 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 SLC35B4Q969S0 331 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 TPD52L3Q96J77 140 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 LRRN3Q9H3W5 708 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 FOLH1BQ9HBA9 442 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 MMACHCQ9Y4U1 282 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 B3GALT1Q9Y5Z6 326 aa11.26□□□□□ -0.61
PRPF39-203ENST00000477626 PCNX3Q9H6A9 2034 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 GXYLT2A0PJZ3 443 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 ADAMDEC1O15204 470 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 PDE9AO76083 593 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 FGF5P12034 268 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 BIKQ13323 160 aa11.25□□□□□ -0.61
PRPF39-203ENST00000477626 EXOSC7Q15024 291 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms