RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 OPN3Q9H1Y3 402 aaPredicted RBP4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 PPIL3Q9H2H8 161 aaKnown RBP4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 METTL8Q9H825 291 aaKnown RBP4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 DDX31Q9H8H2 851 aaKnown RBP4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 HEXA-AS1Q9H8Q6 139 aa4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 PCDH9Q9HC56 1237 aa4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 VAT1LQ9HCJ6 419 aa4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 IL1RAPQ9NPH3 570 aa4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 ASCL3Q9NQ33 180 aa4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 CTPS2Q9NRF8 586 aa4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 TBC1D13Q9NVG8 400 aa4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 MPP6Q9NZW5 540 aa4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 KLHL9Q9P2J3 617 aa4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 METTL1Q9UBP6 276 aaKnown RBP4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 STAP1Q9ULZ2 295 aa4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 KCNIP3Q9Y2W7 256 aa4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 ALG5Q9Y673 324 aa4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 U3KQV3 271 aa4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 LMO7Q8WWI1 1683 aa4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 RREB1Q92766 1687 aa4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 TIAM2Q8IVF5 1701 aa4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 NWD2Q9ULI1 1742 aa4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 TANC1Q9C0D5 1861 aa4.18□□□□□ -1.74
PIKFYVE-209ENST00000477200 ADAMTSL3P82987 1691 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 SIPA1L1O43166 1804 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 GLYATL1P3A0A0U1RQE8 302 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 C2orf92A0A1B0GVN3 265 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 A0A1W2PPC1 479 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 GNG14A0A1W2PPG7 69 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 DHRS12A0PJE2 317 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 FAM234BA2RU67 622 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 KPNA7A9QM74 516 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 KDM4EB2RXH2 506 aaPredicted RBP4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 H7C4K7 107 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 I6L893 689 aaPredicted RBP4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 GRM8O00222 908 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 ZNF195O14628 629 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 DCXO43602 365 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 LCMT2O60294 686 aaKnown RBP4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 TSPAN2O60636 221 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 TSPAN3O60637 253 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 NBNO60934 754 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 WDR47O94967 919 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 MT-CYBP00156 380 aaPredicted RBP4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 LDLRP01130 860 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 CHRNGP07510 517 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 HCKP08631 526 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 ANXA5P08758 320 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 THRBP10828 461 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 CKMT1AP12532 417 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 DAOP14920 347 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 ARSBP15848 533 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 RAB3BP20337 219 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 PVALBP20472 110 aaPredicted RBP4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 DNASE1P24855 282 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 ACADLP28330 430 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 GTF2E2P29084 291 aaKnown RBP4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 RYKP34925 604 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 RFC2P35250 354 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 SLC1A6P48664 564 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 GNG10P50151 68 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 ARSFP54793 590 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 ADPRHP54922 357 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 MAZP56270 477 aaKnown RBP4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 RAB2AP61019 212 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 TFAMQ00059 246 aaKnown RBP4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 GPR17Q13304 367 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 BIKQ13323 160 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 EXOSC2Q13868 293 aaKnown RBP4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 PTCHD3Q3KNS1 767 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 TIMM50Q3ZCQ8 353 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 KRTCAP3Q53RY4 240 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 KHDC1LQ5JSQ8 128 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 ATPAF1Q5TC12 328 aaPredicted RBP4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 GFI1BQ5VTD9 330 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 TMEM236Q5W0B7 351 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 ACAD10Q6JQN1 1059 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 FAM45BPQ6NSW5 357 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 DARS2Q6PI48 645 aaKnown RBP4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 UQCC3Q6UW78 93 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 LRRC8DQ7L1W4 858 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 ADGRD2Q7Z7M1 963 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 ISCA2Q86U28 154 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 TRIM69Q86WT6 500 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 TMEM17Q86X19 198 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 RNF130Q86XS8 419 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 TMC8Q8IU68 726 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 DNAJC22Q8N4W6 341 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 ZNF561Q8N587 486 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 C4orf32Q8N8J7 132 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 ZNF557Q8N988 423 aaPredicted RBP4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 POMGNT2Q8NAT1 580 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 SETD9Q8NE22 299 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 FBXO36Q8NEA4 188 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 DUSP18Q8NEJ0 188 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 ZNF555Q8NEP9 628 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 LNX1Q8TBB1 728 aaPredicted RBP4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 FAM45AQ8TCE6 357 aa4.17□□□□□ -1.74
PIKFYVE-209ENST00000477200 BPIFB1Q8TDL5 484 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms