RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 SLC38A5Q8WUX1 472 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 TM9SF4Q92544 642 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 SCAMP4Q969E2 229 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 UBE2E3Q969T4 207 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 PPCDCQ96CD2 204 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 TM4SF18Q96CE8 201 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 TEFMQ96QE5 360 aaKnown RBP6.46□□□□□ -1.38
UBR4-212ENST00000475973 EDEM2Q9BV94 578 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 BBS2Q9BXC9 721 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 GON7Q9BXV9 100 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 TPSD1Q9BZJ3 242 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.46□□□□□ -1.38
UBR4-212ENST00000475973 SPNS1Q9H2V7 528 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 SERHL2Q9H4I8 314 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 NIPAL2Q9H841 368 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 ZNF556Q9HAH1 456 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 PELI2Q9HAT8 420 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 PRDM8Q9NQV8 689 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 SPHK2Q9NRA0 654 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 ACOXLQ9NUZ1 547 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 TXNL4BQ9NX01 149 aaKnown RBP6.46□□□□□ -1.38
UBR4-212ENST00000475973 TAS2R16Q9NYV7 291 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 CLEC2DQ9UHP7 191 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 ZNF221Q9UK13 617 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 SH2B3Q9UQQ2 575 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 ANGPT4Q9Y264 503 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 EXOGQ9Y2C4 368 aaKnown RBP6.46□□□□□ -1.38
UBR4-212ENST00000475973 PCDHGB7Q9Y5F8 929 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 TICRRQ7Z2Z1 1910 aa6.46□□□□□ -1.38
UBR4-212ENST00000475973 KIF26AQ9ULI4 1882 aaPredicted RBP6.45□□□□□ -1.38
UBR4-212ENST00000475973 LOC100506127A0A0U1RQW1 187 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 TRDV1A0A1B0GX56 115 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 A0A1W2PQ09 198 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 TCRBV21S2A2A0A5A6 115 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 IRGMA1A4Y4 181 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 PRR19A6NJB7 356 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 A8MU76 341 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 NEDD8-MDP1E9PL57 170 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 SGK494L7N484 410 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 SYT5O00445 386 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 HMGN4O00479 90 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 PROM1O43490 865 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 HCN1O60741 890 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 PDE9AO76083 593 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 IGHA1P01876 353 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 OPN1SWP03999 348 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 CTSLP07711 333 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 ADRB1P08588 477 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 EDN3P14138 238 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 HOXB2P14652 356 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 TYRP14679 529 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 ALOX12P18054 663 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 ALAS2P22557 587 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 PDHA2P29803 388 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 AQP1P29972 269 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 CRATP43155 626 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 KIR2DL3P43628 341 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 GIPRP48546 466 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 SLC9A3P48764 834 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 DHPSP49366 369 aaPredicted RBP6.45□□□□□ -1.38
UBR4-212ENST00000475973 DGKGP49619 791 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 GZMKP49863 264 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 TAS2R50P59544 299 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 TBPL1P62380 186 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 IL1RL1Q01638 556 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 RAB40BQ12829 278 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 TMEM115Q12893 351 aaPredicted RBP6.45□□□□□ -1.38
UBR4-212ENST00000475973 ZNF155Q12901 538 aaPredicted RBP6.45□□□□□ -1.38
UBR4-212ENST00000475973 RPA4Q13156 261 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 SLBPQ14493 270 aaKnown RBP eCLIP6.45□□□□□ -1.38
UBR4-212ENST00000475973 ARHGAP19Q14CB8 494 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 SF3A2Q15428 464 aaKnown RBP6.45□□□□□ -1.38
UBR4-212ENST00000475973 SYT14P1Q58G82 188 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 AADACL4Q5VUY2 407 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 PEAR1Q5VY43 1037 aaPredicted RBP6.45□□□□□ -1.38
UBR4-212ENST00000475973 BHLHB9Q6PI77 547 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 TMEM64Q6YI46 380 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 ZNF517Q6ZMY9 492 aaPredicted RBP6.45□□□□□ -1.38
UBR4-212ENST00000475973 COMTD1Q86VU5 262 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 RAB43Q86YS6 212 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 HORMAD2Q8N7B1 307 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 Q8N9G6 341 aaPredicted RBP6.45□□□□□ -1.38
UBR4-212ENST00000475973 ASCC1Q8N9N2 400 aaKnown RBP6.45□□□□□ -1.38
UBR4-212ENST00000475973 POGLUT1Q8NBL1 392 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 ANGPTL6Q8NI99 470 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 TMEM163Q8TC26 289 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 SLC7A13Q8TCU3 470 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 GPR151Q8TDV0 419 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 HMGB4Q8WW32 186 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 SLC5A11Q8WWX8 675 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 NR4A3Q92570 626 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 CIDECQ96AQ7 238 aaPredicted RBP6.45□□□□□ -1.38
UBR4-212ENST00000475973 DTD2Q96FN9 168 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 ZNF514Q96K75 400 aaPredicted RBP6.45□□□□□ -1.38
UBR4-212ENST00000475973 GPA33Q99795 319 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 WFDC6Q9BQY6 131 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 MARVELD1Q9BSK0 173 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 KATNB1Q9BVA0 655 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 RIOK2Q9BVS4 552 aaKnown RBP6.45□□□□□ -1.38
UBR4-212ENST00000475973 SARGQ9BW04 601 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms