RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 SHC2P98077 582 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 EFNB1P98172 346 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 CDK5Q00535 292 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 DUSP8Q13202 625 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 C1orf61Q13536 156 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 TRAM2Q15035 370 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 ELOCQ15369 112 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 OCLNQ16625 522 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 DUSP5Q16690 384 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 INAVAQ3KP66 663 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 LEXMQ3ZCV2 418 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 MEDAGQ5VYS4 303 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 TMEM236Q5W0B7 351 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 NIPAL1Q6NVV3 410 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 OGFOD3Q6PK18 319 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 CHRDL2Q6WN34 429 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 CCDC81Q6ZN84 652 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 C16orf62Q7Z3J2 963 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 GKN2Q86XP6 184 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 NLGN4XQ8N0W4 816 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 SDR16C5Q8N3Y7 309 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 ARL14Q8N4G2 192 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 CDRT4Q8N9R6 151 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 TOR1AIP2Q8NFQ8 470 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 OR4K5Q8NGD3 323 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 OR52P1PQ8NH57 321 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 RLN3Q8WXF3 142 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 PMM1Q92871 262 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 CDS1Q92903 461 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 SLC38A4Q969I6 547 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 ANKRD9Q96BM1 317 aaPredicted RBP9.17□□□□□ -0.94
USP39-214ENST00000474572 CRELD1Q96HD1 420 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 SDF2Q99470 211 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 FNDC11Q9BVV2 318 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 ITPAQ9BY32 194 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 POLDIP3Q9BY77 421 aaKnown RBP9.17□□□□□ -0.94
USP39-214ENST00000474572 TPSD1Q9BZJ3 242 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 CHRNA10Q9GZZ6 450 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 RAB33BQ9H082 229 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 QRSL1Q9H0R6 528 aaKnown RBP9.17□□□□□ -0.94
USP39-214ENST00000474572 EVA1AQ9H8M9 152 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 MTHFD2LQ9H903 347 aaPredicted RBP9.17□□□□□ -0.94
USP39-214ENST00000474572 PLGRKTQ9HBL7 147 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 EQTNQ9NQ60 294 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 POLE3Q9NRF9 147 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 ENAMQ9NRM1 1142 aa9.17□□□□□ -0.94
USP39-214ENST00000474572 WARS2Q9UGM6 360 aaKnown RBP9.17□□□□□ -0.94
USP39-214ENST00000474572 ZNF443Q9Y2A4 671 aaPredicted RBP9.17□□□□□ -0.94
USP39-214ENST00000474572 MRPS17Q9Y2R5 130 aaKnown RBP9.17□□□□□ -0.94
USP39-214ENST00000474572 GPR55Q9Y2T6 319 aaPredicted RBP9.17□□□□□ -0.94
USP39-214ENST00000474572 A0A1W2PPC1 479 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 BLACEA4D250 179 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 ZNF860A6NHJ4 632 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 AGAP5A6NIR3 686 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 B4DGG1 531 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 KLF4O43474 513 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 KIAA0513O60268 411 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 FCMRO60667 390 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 SRPX2O60687 465 aaPredicted RBP9.16□□□□□ -0.94
USP39-214ENST00000474572 CYP7B1O75881 506 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 UBXN7O94888 489 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 SOX30O94993 753 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 NKX2-2O95096 273 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 OR5F1O95221 314 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 SLC35E2P0CK97 266 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 ADORA3P0DMS8 318 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 PSMB9P28065 219 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 STT3AP46977 705 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 CAPZBP47756 277 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 ENTPD1P49961 510 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 ZNF136P52737 540 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 NUDT6P53370 316 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 MLLT10P55197 1068 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 VSX2P58304 361 aaPredicted RBP9.16□□□□□ -0.94
USP39-214ENST00000474572 RACK1P63244 317 aaKnown RBP9.16□□□□□ -0.94
USP39-214ENST00000474572 EEF1A1P68104 462 aaKnown RBP9.16□□□□□ -0.94
USP39-214ENST00000474572 ST3GAL3Q11203 375 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 MAP4K2Q12851 820 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 BNIP3Q12983 259 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 TARDBPQ13148 414 aaKnown RBP eCLIP9.16□□□□□ -0.94
USP39-214ENST00000474572 MOGQ16653 247 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 DECR1Q16698 335 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 PUS10Q3MIT2 529 aaKnown RBP9.16□□□□□ -0.94
USP39-214ENST00000474572 TRMT12Q53H54 448 aaKnown RBP9.16□□□□□ -0.94
USP39-214ENST00000474572 EIPR1Q53HC9 387 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 RNLSQ5VYX0 342 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 ARMC6Q6NXE6 501 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 KLHL35Q6PF15 583 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 ZNF836Q6ZNA1 936 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 PTCHD4Q6ZW05 846 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 ZNF367Q7RTV3 350 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 SLC46A3Q7Z3Q1 461 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 CROCCP3Q8IVE0 287 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 OR4N5Q8IXE1 308 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 ZNF619Q8N2I2 560 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 FAM160A2Q8N612 972 aaPredicted RBP9.16□□□□□ -0.94
USP39-214ENST00000474572 SIMC1Q8NDZ2 872 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 OR5T3Q8NGG3 340 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 OR8J1Q8NGP2 316 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 C1orf216Q8TAB5 229 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms