RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 DNASE1P24855 282 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 MST1P26927 711 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 C21orf33P30042 268 aaPredicted RBP5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 ADRA1AP35348 466 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 CPOXP36551 454 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 RGS6P49758 472 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 RPS7P62081 194 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 EFNB1P98172 346 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 RBPJQ06330 500 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 FGL1Q08830 312 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 HNF4GQ14541 408 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 MTF1Q14872 753 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 SLC1A5Q15758 541 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 CCDC6Q16204 474 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 ZNF528Q3MIS6 628 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 KIAA1755Q5JYT7 1200 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 TMEM63BQ5T3F8 832 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 UBAP2Q5T6F2 1119 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 FAM92BQ6ZTR7 304 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 ZNF546Q86UE3 836 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 YAF2Q8IY57 180 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 OR56A3Q8NH54 315 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 TRMT10AQ8TBZ6 339 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 SPPL2AQ8TCT8 520 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 CXorf40AQ8TE69 158 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 RNF133Q8WVZ7 376 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 OSTF1Q92882 214 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 CAVIN3Q969G5 261 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 TSSK3Q96PN8 268 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 CCT8L2Q96SF2 557 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 SPAG8Q99932 426 aaPredicted RBP5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 TMED9Q9BVK6 235 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 YTHDF1Q9BYJ9 559 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 EBF3Q9H4W6 596 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 WDR54Q9H977 334 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 MIOSQ9NXC5 875 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 RNF14Q9UBS8 474 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 FBXW11Q9UKB1 542 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 DNAJC12Q9UKB3 198 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 CHD9Q3L8U1 2897 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 OTOFQ9HC10 1997 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 CEP295Q9C0D2 2601 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 NAV3Q8IVL0 2385 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 ILVBLA1L0T0 632 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 C2orf78A6NCI8 922 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 RNASEK-C17orf49H0YIS7 233 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 M0QZ92 97 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 PRICKLE3O43900 615 aaPredicted RBP5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 LCMT2O60294 686 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 ZMPSTE24O75844 475 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 B3GAT3O94766 335 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 STBD1O95210 358 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 ATP6V1G2O95670 118 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 ERCC1P07992 297 aaPredicted RBP5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 UBCP0CG48 685 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 RD3LP0DJH9 198 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 DAOP14920 347 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 GSPT1P15170 499 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 ZNF28P17035 718 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 GNAZP19086 355 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 THBS4P35443 961 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 COMPP49747 757 aaPredicted RBP5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 PRKXP51817 358 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 DGKQP52824 942 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 ADARB1P78563 741 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 MEF2AQ02078 507 aaPredicted RBP5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 PDIA2Q13087 525 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 CTBP1Q13363 440 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 ITIH4Q14624 930 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 GSTA3Q16772 222 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 SPOUT1Q5T280 376 aaKnown RBP5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 PODNL1Q6PEZ8 512 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 SPESP1Q6UW49 350 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 TREML4Q6UXN2 200 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 HSDL2Q6YN16 418 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 CYHR1Q6ZMK1 362 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 TECPR1Q7Z6L1 1165 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 HS3ST5Q8IZT8 346 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 SPATA6LQ8N4H0 392 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 OR2I1PQ8NGU4 316 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 CHPT1Q8WUD6 406 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 UBTD2Q8WUN7 234 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 HOXB13Q92826 284 aaPredicted RBP5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 IRF7Q92985 503 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 FAM46BQ96A09 425 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 CPB2Q96IY4 423 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 LMLNQ96KR4 655 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 TCEAL7Q9BRU2 100 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 NICN1Q9BSH3 213 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 TSSK1BQ9BXA7 367 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 NMNAT2Q9BZQ4 307 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 KLHL31Q9H511 634 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 SMYD3Q9H7B4 428 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 MYNNQ9NPC7 610 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 GPATCH2Q9NW75 528 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 VAPAQ9P0L0 249 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 SMPXQ9UHP9 88 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 ZNF639Q9UID6 485 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 PLAGL1Q9UM63 463 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 ENTPD2Q9Y5L3 495 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms