RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 LIPT1Q9Y234 373 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 NPIPA5A0A0B4J1W7 369 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 GXYLT2A0PJZ3 443 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 NPIPA7E9PJI5 369 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 NPIPA8P0DM63 369 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 S1PR1P21453 382 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 ALAS2P22557 587 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 SSTR4P31391 388 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 GPLD1P80108 840 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 HOXC5Q00444 222 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 STX4Q12846 297 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 NPRL3Q12980 569 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 LPAL2Q16609 132 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 ZNF574Q6ZN55 896 aaPredicted RBP16.79■□□□□ 0.28
VARS2-206ENST00000473916 CLIP4Q8N3C7 705 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 D2HGDHQ8N465 521 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 GTPBP3Q969Y2 492 aaKnown RBP16.79■□□□□ 0.28
VARS2-206ENST00000473916 TMIGD2Q96BF3 282 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 PRTFDC1Q9NRG1 225 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 NDOR1Q9UHB4 597 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 DTX4Q9Y2E6 619 aa16.79■□□□□ 0.28
VARS2-206ENST00000473916 DUXAA6NLW8 204 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 CCNB2O95067 398 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 NTN1O95631 604 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 ELAVL4P26378 380 aaKnown RBP16.78■□□□□ 0.28
VARS2-206ENST00000473916 AVPR1BP47901 424 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 LSM11P83369 360 aaKnown RBP eCLIP16.78■□□□□ 0.282e-6■■□□□ 13.5
VARS2-206ENST00000473916 HPCAP84074 193 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 ARHGAP11BQ3KRB8 267 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 COLEC12Q5KU26 742 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 PRAMEF8Q5VWM4 474 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 PRAMEF7Q5VXH5 474 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 ZNF770Q6IQ21 691 aaPredicted RBP16.78■□□□□ 0.28
VARS2-206ENST00000473916 NLGN4XQ8N0W4 816 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 TAGAPQ8N103 731 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 OR4C6Q8NH72 309 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 SLC41A2Q96JW4 573 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 SDF2Q99470 211 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 PINK1Q9BXM7 581 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 ADNPQ9H2P0 1102 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 PIGUQ9H490 435 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 NECTIN3Q9NQS3 549 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 SUSD2Q9UGT4 822 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 ACAD8Q9UKU7 415 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 NTNG1Q9Y2I2 539 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 CFAP54Q96N23 3096 aa16.78■□□□□ 0.28
VARS2-206ENST00000473916 ZNF749O43361 778 aa16.77■□□□□ 0.28
VARS2-206ENST00000473916 CTNSO60931 367 aa16.77■□□□□ 0.28
VARS2-206ENST00000473916 RPP38P78345 283 aaKnown RBP16.77■□□□□ 0.28
VARS2-206ENST00000473916 IL5RAQ01344 420 aa16.77■□□□□ 0.28
VARS2-206ENST00000473916 ZNF155Q12901 538 aaPredicted RBP16.77■□□□□ 0.28
VARS2-206ENST00000473916 GPR68Q15743 365 aa16.77■□□□□ 0.28
VARS2-206ENST00000473916 FIGNL1Q6PIW4 674 aa16.77■□□□□ 0.28
VARS2-206ENST00000473916 ZAR1Q86SH2 424 aa16.77■□□□□ 0.28
VARS2-206ENST00000473916 GALNT12Q8IXK2 581 aa16.77■□□□□ 0.28
VARS2-206ENST00000473916 AQP11Q8NBQ7 271 aa16.77■□□□□ 0.28
VARS2-206ENST00000473916 OR52P1PQ8NH57 321 aa16.77■□□□□ 0.28
VARS2-206ENST00000473916 DHRS1Q96LJ7 313 aa16.77■□□□□ 0.28
VARS2-206ENST00000473916 SPATA5L1Q9BVQ7 753 aa16.77■□□□□ 0.28
VARS2-206ENST00000473916 GABARAPL3Q9BY60 117 aa16.77■□□□□ 0.28
VARS2-206ENST00000473916 SMOC1Q9H4F8 434 aa16.77■□□□□ 0.28
VARS2-206ENST00000473916 PAPOLBQ9NRJ5 636 aaKnown RBP16.77■□□□□ 0.28
VARS2-206ENST00000473916 NDRG4Q9ULP0 352 aaKnown RBP16.77■□□□□ 0.28
VARS2-206ENST00000473916 WDR45Q9Y484 360 aa16.77■□□□□ 0.28
VARS2-206ENST00000473916 GMPPBQ9Y5P6 360 aa16.77■□□□□ 0.28
VARS2-206ENST00000473916 E9PQ18 207 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 UGT2B11O75310 529 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 GASTP01350 101 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 ALOX5P09917 674 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 CBLP22681 906 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 MAP3K8P41279 467 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 SKP1P63208 163 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 IGLV3-21P80748 117 aaPredicted RBP16.77■□□□□ 0.27
VARS2-206ENST00000473916 MAPK14Q16539 360 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 C6orf141Q5SZD1 244 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 DCST2Q5T1A1 773 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 WDR74Q6RFH5 385 aaPredicted RBP16.77■□□□□ 0.27
VARS2-206ENST00000473916 ZNF595Q8IYB9 648 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 EID2Q8N6I1 236 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 RCBTB1Q8NDN9 531 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 GPR151Q8TDV0 419 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 RIT1Q92963 219 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 YIPF2Q9BWQ6 316 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 EPB41L1Q9H4G0 881 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 MAN2C1Q9NTJ4 1040 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 CALML5Q9NZT1 146 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 SEMA5BQ9P283 1151 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 KCNE5Q9UJ90 142 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 MRPS33Q9Y291 106 aaKnown RBP16.77■□□□□ 0.27
VARS2-206ENST00000473916 SLC9A8Q9Y2E8 581 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 WDFY3Q8IZQ1 3526 aa16.77■□□□□ 0.27
VARS2-206ENST00000473916 A0A1W2PQM1 296 aa16.76■□□□□ 0.27
VARS2-206ENST00000473916 TMEM221A6NGB7 291 aa16.76■□□□□ 0.27
VARS2-206ENST00000473916 M0R296 226 aa16.76■□□□□ 0.27
VARS2-206ENST00000473916 H1F0P07305 194 aaKnown RBP16.76■□□□□ 0.27
VARS2-206ENST00000473916 GABRA3P34903 492 aa16.76■□□□□ 0.27
VARS2-206ENST00000473916 EFNA3P52797 238 aa16.76■□□□□ 0.27
VARS2-206ENST00000473916 PIGFQ07326 219 aa16.76■□□□□ 0.27
VARS2-206ENST00000473916 NR0B2Q15466 257 aa16.76■□□□□ 0.27
VARS2-206ENST00000473916 PRSS42Q7Z5A4 293 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms