RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 HGDQ93099 445 aa14.28□□□□□ -0.12
MRPL55-226ENST00000473066 VSTM2LQ96N03 204 aa14.28□□□□□ -0.12
MRPL55-226ENST00000473066 AMDHD1Q96NU7 426 aa14.28□□□□□ -0.12
MRPL55-226ENST00000473066 REEP4Q9H6H4 257 aa14.28□□□□□ -0.12
MRPL55-226ENST00000473066 ALKBH4Q9NXW9 302 aa14.28□□□□□ -0.12
MRPL55-226ENST00000473066 TNFRSF10DQ9UBN6 386 aa14.28□□□□□ -0.12
MRPL55-226ENST00000473066 INTS1Q8N201 2190 aaKnown RBP14.27□□□□□ -0.12
MRPL55-226ENST00000473066 FAM47E-STBD1D6RA91 191 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 LSM1O15116 133 aaKnown RBP14.27□□□□□ -0.13
MRPL55-226ENST00000473066 TYROBPO43914 113 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 UGT2B11O75310 529 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 ERLIN1O75477 346 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 HSPA4LO95757 839 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 HOXD4P09016 255 aaPredicted RBP14.27□□□□□ -0.13
MRPL55-226ENST00000473066 CREB1P16220 341 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 TACR1P25103 407 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 GRNP28799 593 aaKnown RBP14.27□□□□□ -0.13
MRPL55-226ENST00000473066 CHRNB4P30926 498 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 SOX18P35713 384 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 RPL3P39023 403 aaKnown RBP14.27□□□□□ -0.13
MRPL55-226ENST00000473066 SERPINB4P48594 390 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 CDK9P50750 372 aaKnown RBP14.27□□□□□ -0.13
MRPL55-226ENST00000473066 CORO7P57737 925 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 HSPB3Q12988 150 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 KIAA0040Q15053 153 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 ATP6AP1LQ52LC2 224 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 EMC4Q5J8M3 183 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 C1orf185Q5T7R7 199 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 Q6ZSR9 355 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 LARP4Q71RC2 724 aaKnown RBP eCLIP14.27□□□□□ -0.13
MRPL55-226ENST00000473066 SZRD1Q7Z422 152 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 R3HCC1LQ7Z5L2 792 aaKnown RBP14.27□□□□□ -0.13
MRPL55-226ENST00000473066 OR10Q1Q8NGQ4 319 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 CLHC1Q8NHS4 586 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 ZBED6CLQ96FA7 236 aaPredicted RBP14.27□□□□□ -0.13
MRPL55-226ENST00000473066 SLC35A4Q96G79 324 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 ZNF764Q96H86 408 aaPredicted RBP14.27□□□□□ -0.13
MRPL55-226ENST00000473066 EGLN2Q96KS0 407 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 FCRL1Q96LA6 429 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 NODALQ96S42 347 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 TUBB1Q9H4B7 451 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 GLIPR2Q9H4G4 154 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 Q9N2J8 555 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 SSU72Q9NP77 194 aaKnown RBP14.27□□□□□ -0.13
MRPL55-226ENST00000473066 SH3BP4Q9P0V3 963 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 SPRR3Q9UBC9 169 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 MRTO4Q9UKD2 239 aaKnown RBP14.27□□□□□ -0.13
MRPL55-226ENST00000473066 MAPRE3Q9UPY8 281 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 HCFC1P51610 2035 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 UNC79Q9P2D8 2635 aa14.27□□□□□ -0.13
MRPL55-226ENST00000473066 PLOD2O00469 737 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 SNPHO15079 494 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 TM9SF1O15321 606 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 IFI6P09912 130 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 CT45A8P0DMV1 189 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 CT45A9P0DMV2 189 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 PTGER4P35408 488 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 NUP107P57740 925 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 PMPCAQ10713 525 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 CT45A2Q5DJT8 189 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 TIGD3Q6B0B8 471 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 ANKRD26P1Q6NSI1 321 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 NPSR1Q6W5P4 371 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 MARVELD2Q8N4S9 558 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 MTERF3Q96E29 417 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 PKNOX2Q96KN3 472 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 GNRHR2Q96P88 292 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 ZIM3Q96PE6 472 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 ADOQ96SZ5 270 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 C3orf14Q9HBI5 128 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 KCNK9Q9NPC2 374 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 C19orf53Q9UNZ5 99 aaPredicted RBP14.26□□□□□ -0.13
MRPL55-226ENST00000473066 RNF6Q9Y252 685 aa14.26□□□□□ -0.13
MRPL55-226ENST00000473066 WDR91A4D1P6 747 aa14.25□□□□□ -0.13
MRPL55-226ENST00000473066 TTC36A6NLP5 189 aa14.25□□□□□ -0.13
MRPL55-226ENST00000473066 FAM90A27PA6NNH2 459 aa14.25□□□□□ -0.13
MRPL55-226ENST00000473066 TBX19O60806 448 aa14.25□□□□□ -0.13
MRPL55-226ENST00000473066 ICOSLGO75144 302 aa14.25□□□□□ -0.13
MRPL55-226ENST00000473066 PEX11AO75192 247 aa14.25□□□□□ -0.13
MRPL55-226ENST00000473066 NME6O75414 186 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-226ENST00000473066 ZWINTO95229 277 aa14.25□□□□□ -0.13
MRPL55-226ENST00000473066 SERPINE1P05121 402 aa14.25□□□□□ -0.13
MRPL55-226ENST00000473066 HPNP05981 417 aa14.25□□□□□ -0.13
MRPL55-226ENST00000473066 SNRPB2P08579 225 aaKnown RBP14.25□□□□□ -0.13
MRPL55-226ENST00000473066 ENDOUP21128 410 aaKnown RBP14.25□□□□□ -0.13
MRPL55-226ENST00000473066 ETV4P43268 484 aa14.25□□□□□ -0.13
MRPL55-226ENST00000473066 PNLIPRP2P54317 469 aa14.25□□□□□ -0.13
MRPL55-226ENST00000473066 PSMD4P55036 377 aaKnown RBP14.25□□□□□ -0.13
MRPL55-226ENST00000473066 MANFP55145 182 aaKnown RBP14.25□□□□□ -0.13
MRPL55-226ENST00000473066 SF3B4Q15427 424 aaKnown RBP eCLIP14.25□□□□□ -0.13
MRPL55-226ENST00000473066 DECR1Q16698 335 aa14.25□□□□□ -0.13
MRPL55-226ENST00000473066 RFTN2Q52LD8 501 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-226ENST00000473066 DESI1Q6ICB0 168 aa14.25□□□□□ -0.13
MRPL55-226ENST00000473066 LRIG3Q6UXM1 1119 aa14.25□□□□□ -0.13
MRPL55-226ENST00000473066 ZNF551Q7Z340 670 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-226ENST00000473066 GDF7Q7Z4P5 450 aa14.25□□□□□ -0.13
MRPL55-226ENST00000473066 PM20D2Q8IYS1 436 aa14.25□□□□□ -0.13
MRPL55-226ENST00000473066 KIRREL3Q8IZU9 778 aa14.25□□□□□ -0.13
MRPL55-226ENST00000473066 OR2L13Q8N349 312 aa14.25□□□□□ -0.13
MRPL55-226ENST00000473066 RPRMLQ8N4K4 120 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms