RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 CFLARO15519 480 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 TSPAN2O60636 221 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 EDF1O60869 148 aaKnown RBP14.04□□□□□ -0.16
SDC3-203ENST00000471567 SCN2BO60939 215 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 REM1O75628 298 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 SOX30O94993 753 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 SNX4O95219 450 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 S100A3P33764 101 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 KRT20P35900 424 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 PIGAP37287 484 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 MAP3K8P41279 467 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 CASP3P42574 277 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 DNASE1L1P49184 302 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 CCT3P49368 545 aaKnown RBP14.04□□□□□ -0.16
SDC3-203ENST00000471567 PRIM2P49643 509 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 IDH3AP50213 366 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 PNLIPRP2P54317 469 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 PRKAG1P54619 331 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 AQP5P55064 265 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 UFM1P61960 85 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 FOXO1Q12778 655 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 EFR3AQ14156 821 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 HYAL4Q2M3T9 481 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 RNFT1Q5M7Z0 435 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 SLC22A16Q86VW1 577 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 OR56A1Q8NGH5 318 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 SFXN5Q8TD22 340 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 TMCO6Q96DC7 493 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 GPR137Q96N19 417 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 COL21A1Q96P44 957 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 ANGPTL4Q9BY76 406 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 CXorf36Q9H7Y0 433 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 PROK2Q9HC23 129 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 SDR39U1Q9NRG7 319 aaPredicted RBP14.04□□□□□ -0.16
SDC3-203ENST00000471567 ZCCHC3Q9NUD5 404 aaKnown RBP14.04□□□□□ -0.16
SDC3-203ENST00000471567 FAM120CQ9NX05 1096 aaKnown RBP14.04□□□□□ -0.16
SDC3-203ENST00000471567 ZIM2Q9NZV7 527 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 SEC14L3Q9UDX4 400 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 MRTO4Q9UKD2 239 aaKnown RBP14.04□□□□□ -0.16
SDC3-203ENST00000471567 CBLCQ9ULV8 474 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 PCDHGB4Q9UN71 923 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 SNX8Q9Y5X2 465 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.04□□□□□ -0.16
SDC3-203ENST00000471567 A0A0G2JMM0 328 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 A0A1W2PPB8 328 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 A0A1W2PRS3 328 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 PINLYPA6NC86 204 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 KIR3DP1A8MWS1 328 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 NPIPA5E9PKD4 350 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 G3V3Y1 287 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 TFECO14948 347 aaPredicted RBP14.03□□□□□ -0.16
SDC3-203ENST00000471567 ASNA1O43681 348 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 UGT2B11O75310 529 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 SLC22A3O75751 556 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 GLSO94925 669 aaPredicted RBP14.03□□□□□ -0.16
SDC3-203ENST00000471567 NKX2-2O95096 273 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 IL12BP29460 328 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 GABRA3P34903 492 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 UQCRFS1P47985 274 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 MRPL19P49406 292 aaKnown RBP14.03□□□□□ -0.16
SDC3-203ENST00000471567 NME5P56597 212 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 PPIAP62937 165 aaKnown RBP14.03□□□□□ -0.16
SDC3-203ENST00000471567 KCNJ2P63252 427 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 HBA1P69905 142 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 PHC1P78364 1004 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 IRX1P78414 480 aaPredicted RBP14.03□□□□□ -0.16
SDC3-203ENST00000471567 PLGLB1Q02325 96 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 LRRC74AQ0VAA2 488 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 MRPL49Q13405 166 aaKnown RBP14.03□□□□□ -0.16
SDC3-203ENST00000471567 SNTA1Q13424 505 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 GAB1Q13480 694 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 DECR1Q16698 335 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 FAM174BQ3ZCQ3 159 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 SPANXN4Q5MJ08 99 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 EXOSC6Q5RKV6 272 aaKnown RBP14.03□□□□□ -0.16
SDC3-203ENST00000471567 PRAMEF20Q5VT98 475 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 TMEM198Q66K66 360 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 MFSD12Q6NUT3 480 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 SLC30A6Q6NXT4 461 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 BHLHB9Q6PI77 547 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 GFRALQ6UXV0 394 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 SZRD1Q7Z422 152 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 NTNG2Q96CW9 530 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 TEX37Q96LM6 180 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 SIKE1Q9BRV8 207 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 DOHHQ9BU89 302 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 TTTY12Q9BZ98 90 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 EQTNQ9NQ60 294 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 GIN1Q9NXP7 522 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 TUBA8Q9NY65 449 aaPredicted RBP14.03□□□□□ -0.16
SDC3-203ENST00000471567 BOKQ9UMX3 212 aaPredicted RBP14.03□□□□□ -0.16
SDC3-203ENST00000471567 NPIPA1Q9UND3 350 aa14.03□□□□□ -0.16
SDC3-203ENST00000471567 SVILO95425 2214 aa14.02□□□□□ -0.16
SDC3-203ENST00000471567 ESPL1Q14674 2120 aa14.02□□□□□ -0.16
SDC3-203ENST00000471567 TRIM3O75382 744 aaPredicted RBP14.02□□□□□ -0.17
SDC3-203ENST00000471567 UNC5CO95185 931 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 IL6P05231 212 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 PGRP06401 933 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 KRT16P08779 473 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 ALOX5P09917 674 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms