RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 LIPKQ5VXJ0 399 aa3.72□□□□□ -1.81
XRN1-207ENST00000468894 APOBEC3FQ8IUX4 373 aaKnown RBP3.72□□□□□ -1.81
XRN1-207ENST00000468894 SPC24Q8NBT2 197 aa3.72□□□□□ -1.81
XRN1-207ENST00000468894 KIR2DL4Q99706 377 aa3.72□□□□□ -1.81
XRN1-207ENST00000468894 CBWD1Q9BRT8 395 aa3.72□□□□□ -1.81
XRN1-207ENST00000468894 TEX13AQ9BXU3 409 aaPredicted RBP3.72□□□□□ -1.81
XRN1-207ENST00000468894 SIRPDQ9H106 197 aa3.72□□□□□ -1.81
XRN1-207ENST00000468894 FAM124BQ9H5Z6 455 aaPredicted RBP3.72□□□□□ -1.81
XRN1-207ENST00000468894 PLSCR3Q9NRY6 295 aa3.72□□□□□ -1.81
XRN1-207ENST00000468894 KLRF1Q9NZS2 232 aa3.72□□□□□ -1.81
XRN1-207ENST00000468894 HMG20BQ9P0W2 317 aa3.72□□□□□ -1.81
XRN1-207ENST00000468894 DPM3Q9P2X0 92 aa3.72□□□□□ -1.81
XRN1-207ENST00000468894 KLHL21Q9UJP4 597 aa3.72□□□□□ -1.81
XRN1-207ENST00000468894 APPL1Q9UKG1 709 aa3.72□□□□□ -1.81
XRN1-207ENST00000468894 TRBV2A0A0J9YWF9 115 aa3.71□□□□□ -1.82
XRN1-207ENST00000468894 TOXO94900 526 aa3.71□□□□□ -1.82
XRN1-207ENST00000468894 OLFM2O95897 454 aa3.71□□□□□ -1.82
XRN1-207ENST00000468894 PNPP00491 289 aa3.71□□□□□ -1.82
XRN1-207ENST00000468894 KRT6AP02538 564 aa3.71□□□□□ -1.82
XRN1-207ENST00000468894 KRT6BP04259 564 aa3.71□□□□□ -1.82
XRN1-207ENST00000468894 IGHV1-2P23083 117 aa3.71□□□□□ -1.82
XRN1-207ENST00000468894 KRT6CP48668 564 aa3.71□□□□□ -1.82
XRN1-207ENST00000468894 METAP1P53582 386 aa3.71□□□□□ -1.82
XRN1-207ENST00000468894 SSTP61278 116 aa3.71□□□□□ -1.82
XRN1-207ENST00000468894 EIF2B1Q14232 305 aaKnown RBP3.71□□□□□ -1.82
XRN1-207ENST00000468894 HERC4Q5GLZ8 1057 aaPredicted RBP3.71□□□□□ -1.82
XRN1-207ENST00000468894 LGSNQ5TDP6 509 aa3.71□□□□□ -1.82
XRN1-207ENST00000468894 LINC01006Q8NI28 216 aa3.71□□□□□ -1.82
XRN1-207ENST00000468894 CCDC51Q96ER9 411 aa3.71□□□□□ -1.82
XRN1-207ENST00000468894 TSPAN18Q96SJ8 248 aa3.71□□□□□ -1.82
XRN1-207ENST00000468894 TM2D1Q9BX74 207 aa3.71□□□□□ -1.82
XRN1-207ENST00000468894 ELOVL4Q9GZR5 314 aa3.71□□□□□ -1.82
XRN1-207ENST00000468894 TRIM10Q9UDY6 481 aa3.71□□□□□ -1.82
XRN1-207ENST00000468894 ABCG2Q9UNQ0 655 aa3.71□□□□□ -1.82
XRN1-207ENST00000468894 H3BMH7 237 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 HSF2BPO75031 334 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 GNSP15586 552 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 ELK1P19419 428 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 COPB2P35606 906 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 CASP9P55211 416 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 BTG3Q14201 252 aaPredicted RBP3.7□□□□□ -1.82
XRN1-207ENST00000468894 RFTN1Q14699 578 aaPredicted RBP3.7□□□□□ -1.82
XRN1-207ENST00000468894 ACSF3Q4G176 576 aaPredicted RBP3.7□□□□□ -1.82
XRN1-207ENST00000468894 AGKQ53H12 422 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 ADGRD2Q7Z7M1 963 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 ADAMTSL2Q86TH1 951 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 CEND1Q8N111 149 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 LRRC17Q8N6Y2 441 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 U2AF1L4Q8WU68 220 aaKnown RBP3.7□□□□□ -1.82
XRN1-207ENST00000468894 PHYHIPQ92561 330 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 FAM122AQ96E09 287 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 DPH7Q9BTV6 452 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 C19orf24Q9BVV8 132 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 DDX47Q9H0S4 455 aaKnown RBP3.7□□□□□ -1.82
XRN1-207ENST00000468894 MEPEQ9NQ76 525 aaPredicted RBP3.7□□□□□ -1.82
XRN1-207ENST00000468894 EXOSC3Q9NQT5 275 aaKnown RBP3.7□□□□□ -1.82
XRN1-207ENST00000468894 FAM114A2Q9NRY5 505 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 MTRRQ9UBK8 725 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 APOBEC3BQ9UH17 382 aaKnown RBP3.7□□□□□ -1.82
XRN1-207ENST00000468894 CCPG1Q9ULG6 757 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 CA5BQ9Y2D0 317 aa3.7□□□□□ -1.82
XRN1-207ENST00000468894 IGLV8-61A0A075B6I0 122 aa3.69□□□□□ -1.82
XRN1-207ENST00000468894 TRBV7-9A0A0J9YWB2 115 aa3.69□□□□□ -1.82
XRN1-207ENST00000468894 H0Y9J4 135 aa3.69□□□□□ -1.82
XRN1-207ENST00000468894 ACVR1BP36896 505 aa3.69□□□□□ -1.82
XRN1-207ENST00000468894 MAGEA4P43358 317 aa3.69□□□□□ -1.82
XRN1-207ENST00000468894 STK19P49842 368 aaPredicted RBP3.69□□□□□ -1.82
XRN1-207ENST00000468894 NME3Q13232 169 aa3.69□□□□□ -1.82
XRN1-207ENST00000468894 IL18R1Q13478 541 aa3.69□□□□□ -1.82
XRN1-207ENST00000468894 GLYR1Q49A26 553 aaPredicted RBP3.69□□□□□ -1.82
XRN1-207ENST00000468894 C2orf83Q53S99 150 aa3.69□□□□□ -1.82
XRN1-207ENST00000468894 PNCKQ6P2M8 343 aa3.69□□□□□ -1.82
XRN1-207ENST00000468894 GPBP1Q86WP2 473 aa3.69□□□□□ -1.82
XRN1-207ENST00000468894 COQ7Q99807 217 aa3.69□□□□□ -1.82
XRN1-207ENST00000468894 CLIP2Q9UDT6 1046 aa3.69□□□□□ -1.82
XRN1-207ENST00000468894 FZR1Q9UM11 496 aa3.69□□□□□ -1.82
XRN1-207ENST00000468894 BARX2Q9UMQ3 279 aaPredicted RBP3.69□□□□□ -1.82
XRN1-207ENST00000468894 DHRS7Q9Y394 339 aa3.69□□□□□ -1.82
XRN1-207ENST00000468894 NPIPA2E9PIF3 369 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 LATO43561 262 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 CXCL10P02778 98 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 PROS1P07225 676 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 PTBP1P26599 531 aaKnown RBP eCLIP3.68□□□□□ -1.82
XRN1-207ENST00000468894 SLC6A8P48029 635 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 STX17P56962 302 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 RIPPLY3P57055 190 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 NOP14P78316 857 aaKnown RBP3.68□□□□□ -1.82
XRN1-207ENST00000468894 PUDPQ08623 228 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 OVGP1Q12889 678 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 ZSWIM7Q19AV6 140 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 DCAF4L1Q3SXM0 396 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 LRIT3Q3SXY7 679 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 HACD2Q6Y1H2 254 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 C1orf186Q6ZWK4 172 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 LEMD2Q8NC56 503 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 OR52E1Q8NGJ3 308 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 EXOC6Q8TAG9 804 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 URGCPQ8TCY9 931 aa3.68□□□□□ -1.82
XRN1-207ENST00000468894 CCDC43Q96MW1 224 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms