RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 CSTF3Q12996 717 aaKnown RBP19.14■□□□□ 0.65
COL9A3-207ENST00000467819 RASA2Q15283 850 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 WHAMMP3Q1A5X7 153 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 UNC50Q53HI1 259 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 ZNF678Q5SXM1 525 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 PLCZ1Q86YW0 608 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 MMGT1Q8N4V1 131 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 OR9A2Q8NGT5 310 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 ZNF675Q8TD23 568 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 POM121Q96HA1 1249 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 TMEM237Q96Q45 408 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 ALPK1Q96QP1 1244 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 ADOQ96SZ5 270 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 RBM24Q9BX46 236 aaKnown RBP19.14■□□□□ 0.65
COL9A3-207ENST00000467819 TAS2R10Q9NYW0 307 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 FBXL2Q9UKC9 423 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 WIF1Q9Y5W5 379 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 EXOC1LA0A1B0GW35 172 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 GNG14A0A1W2PPG7 69 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 CLCA1A8K7I4 914 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 RAF1P04049 648 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 HSD3B1P14060 373 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 HSD3B2P26439 372 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 ECHS1P30084 290 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 CPA2P48052 419 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 HTR6P50406 440 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 RAE1P78406 368 aaKnown RBP19.13■□□□□ 0.65
COL9A3-207ENST00000467819 ERCC6LQ2NKX8 1250 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 OR5M10Q6IEU7 315 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 GPRIN3Q6ZVF9 776 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 GCNT2Q8N0V5 402 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 METTL6Q8TCB7 284 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 INTS12Q96CB8 462 aaKnown RBP19.13■□□□□ 0.65
COL9A3-207ENST00000467819 BTBD9Q96Q07 612 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 TM9SF2Q99805 663 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 YIPF4Q9BSR8 244 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 SFXN3Q9BWM7 321 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 ACPTQ9BZG2 426 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 GALNT8Q9NY28 637 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 TMEM216Q9P0N5 145 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 PCNX3Q9H6A9 2034 aa19.13■□□□□ 0.65
COL9A3-207ENST00000467819 ABCB7O75027 752 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 BCAS2O75934 225 aaPredicted RBP19.12■□□□□ 0.65
COL9A3-207ENST00000467819 CT45A8P0DMV1 189 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 CT45A9P0DMV2 189 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 DRD2P14416 443 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 IL12BP29460 328 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 SRD5A2P31213 254 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 KRT20P35900 424 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 GFRA1P56159 465 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 KEAP1Q14145 624 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 POU4F3Q15319 338 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 CT45A2Q5DJT8 189 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 NPSR1Q6W5P4 371 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 CAMKMTQ7Z624 323 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 MBD6Q96DN6 1003 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 SLC35A4Q96G79 324 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 SFXN2Q96NB2 322 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 ZFP3Q96NJ6 502 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 ZNF382Q96SR6 550 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 G6PC3Q9BUM1 346 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 EBPLQ9BY08 206 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 FOLH1BQ9HBA9 442 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 GIMAP4Q9NUV9 329 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 DKKL1Q9UK85 242 aa19.12■□□□□ 0.65
COL9A3-207ENST00000467819 PLOD2O00469 737 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 DLX3O60479 287 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 TSPAN2O60636 221 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 ULK1O75385 1050 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 RCBTB2O95199 551 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 LHX2P50458 406 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 BTKQ06187 659 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 ACSM2AQ08AH3 577 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 EFR3AQ14156 821 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 SPIN4Q56A73 249 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 ACSM2BQ68CK6 577 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 AAGABQ6PD74 315 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 LARP4Q71RC2 724 aaKnown RBP eCLIP19.11■□□□□ 0.651e-11■□□□□ 8.4
COL9A3-207ENST00000467819 ADGRE4PQ86SQ3 457 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 C16orf78Q8WTQ4 265 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 ZNF592Q92610 1267 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 WNT2BQ93097 391 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 APIPQ96GX9 242 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 VSTM2LQ96N03 204 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 SENP1Q9P0U3 644 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 CLCF1Q9UBD9 225 aa19.11■□□□□ 0.65
COL9A3-207ENST00000467819 RPH3AQ9Y2J0 694 aaPredicted RBP19.11■□□□□ 0.65
COL9A3-207ENST00000467819 C17orf51A8MQB3 221 aa19.1■□□□□ 0.65
COL9A3-207ENST00000467819 ATE1O95260 518 aa19.1■□□□□ 0.65
COL9A3-207ENST00000467819 GRK2P25098 689 aa19.1■□□□□ 0.65
COL9A3-207ENST00000467819 TIA1P31483 386 aaKnown RBP eCLIP19.1■□□□□ 0.65
COL9A3-207ENST00000467819 ADAM8P78325 824 aa19.1■□□□□ 0.65
COL9A3-207ENST00000467819 HEPACAMQ14CZ8 416 aa19.1■□□□□ 0.65
COL9A3-207ENST00000467819 DEFB113Q30KQ7 82 aa19.1■□□□□ 0.65
COL9A3-207ENST00000467819 KRTAP21-3Q3LHN1 58 aa19.1■□□□□ 0.65
COL9A3-207ENST00000467819 LGSNQ5TDP6 509 aa19.1■□□□□ 0.65
COL9A3-207ENST00000467819 SCIMPQ6UWF3 145 aa19.1■□□□□ 0.65
COL9A3-207ENST00000467819 GRAMD2AQ8IUY3 354 aa19.1■□□□□ 0.65
COL9A3-207ENST00000467819 SLC44A2Q8IWA5 706 aaPredicted RBP19.1■□□□□ 0.65
COL9A3-207ENST00000467819 SAMD14Q8IZD0 417 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms