RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 KRT84Q9NSB2 600 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 SMARCAL1Q9NZC9 954 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 SPATA7Q9P0W8 599 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 EIF3LQ9Y262 564 aaKnown RBP4.99□□□□□ -1.61
PTCD3-207ENST00000467273 AAR2Q9Y312 384 aaKnown RBP4.99□□□□□ -1.61
PTCD3-207ENST00000467273 PKD1L1Q8TDX9 2849 aa4.99□□□□□ -1.61
PTCD3-207ENST00000467273 TGP01266 2768 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 FEZF1A0PJY2 475 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 ARHGEF33A8MVX0 844 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 RIPK2O43353 540 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 FMO6PO60774 539 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 PTP4A3O75365 173 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 SEC22BO75396 215 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 PROSCO94903 275 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 GLSO94925 669 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-207ENST00000467273 SOX30O94993 753 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 CCNDBP1O95273 360 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 SNRNP70P08621 437 aaKnown RBP4.98□□□□□ -1.61
PTCD3-207ENST00000467273 ERGP11308 486 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 TMEM11P17152 192 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 TPH1P17752 444 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 ADRA1AP35348 466 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 RFC3P40938 356 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 PTDSS1P48651 473 aaKnown RBP4.98□□□□□ -1.61
PTCD3-207ENST00000467273 PCYT1AP49585 367 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 SKP1P63208 163 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 ARF1P84077 181 aaKnown RBP4.98□□□□□ -1.61
PTCD3-207ENST00000467273 RHAGQ02094 409 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 PLGLB1Q02325 96 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 MSLNQ13421 630 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-207ENST00000467273 SNTB1Q13884 538 aaKnown RBP4.98□□□□□ -1.61
PTCD3-207ENST00000467273 ARHGAP19Q14CB8 494 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 ETFDHQ16134 617 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 ACKR1Q16570 336 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 SYT16Q17RD7 645 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 ZNF674Q2M3X9 581 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 HKDC1Q2TB90 917 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 DPCR1Q3MIW9 517 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 PDCD4Q53EL6 469 aaKnown RBP4.98□□□□□ -1.61
PTCD3-207ENST00000467273 NIPAL1Q6NVV3 410 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 LACC1Q8IV20 430 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 CPOQ8IVL8 374 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 TMEM156Q8N614 296 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 TMCO5AQ8N6Q1 288 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 OR2M7Q8NG81 312 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 OR13C4Q8NGS5 318 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 SYN2Q92777 582 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-207ENST00000467273 GIMAP5Q96F15 307 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 PANX2Q96RD6 677 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 CCL19Q99731 98 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 EBNA1BP2Q99848 306 aaKnown RBP4.98□□□□□ -1.61
PTCD3-207ENST00000467273 DEFB126Q9BYW3 111 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 TTTY12Q9BZ98 90 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 DEFB127Q9H1M4 99 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 HEYLQ9NQ87 328 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-207ENST00000467273 DDX18Q9NVP1 670 aaKnown RBP4.98□□□□□ -1.61
PTCD3-207ENST00000467273 NLE1Q9NVX2 485 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-207ENST00000467273 ADPRHL2Q9NX46 363 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 KLHL8Q9P2G9 620 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-207ENST00000467273 NDRG3Q9UGV2 375 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 LIMA1Q9UHB6 759 aaKnown RBP4.98□□□□□ -1.61
PTCD3-207ENST00000467273 RPS6KA6Q9UK32 745 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 GRID1Q9ULK0 1009 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 TMED5Q9Y3A6 229 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 SNX8Q9Y5X2 465 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 BZW2Q9Y6E2 419 aaKnown RBP4.98□□□□□ -1.61
PTCD3-207ENST00000467273 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.98□□□□□ -1.61
PTCD3-207ENST00000467273 V9GYY5 206 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-207ENST00000467273 MPDZO75970 2070 aa4.98□□□□□ -1.61
PTCD3-207ENST00000467273 KCNE1BA0A087WTH5 132 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 A0A0G2JPF8 293 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 A0A1W2PPR1 153 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 A0A1W2PPV9 198 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 LRRD1A4D1F6 860 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 KRT87PA6NCN2 255 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 MBD3L5A6NJ08 208 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-207ENST00000467273 SAGE2PA6NJ88 616 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 AHRRA9YTQ3 701 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 HACD1B0YJ81 288 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 HNRNPCL3B7ZW38 293 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 CASKO14936 926 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 PIP5K1BO14986 540 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 SPRY1O43609 319 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-207ENST00000467273 CEP104O60308 925 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 GPANK1O95872 356 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 EPPINO95925 133 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 AGTP01019 485 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 ELANEP08246 267 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 HNRNPCL4P0DMR1 293 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 ZNF37AP17032 561 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-207ENST00000467273 JAK1P23458 1154 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 HRH2P25021 359 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 PSMB5P28074 263 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 OPRM1P35372 400 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 HSD17B2P37059 387 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 PPARGP37231 505 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-207ENST00000467273 ETV1P50549 477 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 OR4D2P58180 307 aa4.97□□□□□ -1.61
PTCD3-207ENST00000467273 ABATP80404 500 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms