RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 FUT7Q11130 342 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 ZP4Q12836 540 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 BEND6Q5SZJ8 279 aaPredicted RBP2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 SEL1L2Q5TEA6 688 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 DMKNQ6E0U4 476 aaPredicted RBP2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 PRR5LQ6MZQ0 368 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 ZCCHC12Q6PEW1 402 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 REG3GQ6UW15 175 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 ZNF562Q6V9R5 426 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 NET1Q7Z628 596 aaPredicted RBP2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 CEACAM19Q7Z692 300 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 SLC22A18ASQ8N1D0 253 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 FGFRL1Q8N441 504 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 SUMF1Q8NBK3 374 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 OR52B4Q8NGK2 314 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 GIPC3Q8TF64 312 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 TBC1D31Q96DN5 1066 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 FICDQ9BVA6 458 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 SUDS3Q9H7L9 328 aaPredicted RBP2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 TRPV5Q9NQA5 729 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 POLE3Q9NRF9 147 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 YAE1D1Q9NRH1 226 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 FAM114A2Q9NRY5 505 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 DCAF13Q9NV06 445 aaKnown RBP2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 TAS2R3Q9NYW6 316 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 KLRF1Q9NZS2 232 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 ANKMY1Q9P2S6 941 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 MBD2Q9UBB5 411 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 GHRLQ9UBU3 117 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 ATP6V1HQ9UI12 483 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 KLF2Q9Y5W3 355 aaPredicted RBP2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 U3KQV3 271 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 ABCC4O15439 1325 aa2.9□□□□□ -1.95
HMGXB4-205ENST00000464480 F8WDY8 70 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 PHF1O43189 567 aaPredicted RBP2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 TYROBPO43914 113 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 SDC3O75056 442 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 VPS26AO75436 327 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 SCGB2A1O75556 95 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 TOXO94900 526 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 HOXB7P09629 217 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 FAM200BP0CF97 657 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 FOLR2P14207 255 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 PVRP15151 417 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 PEX19P40855 299 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 HTR5AP47898 357 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 NAPAP54920 295 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 MRPS6P82932 125 aaKnown RBP2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 PRKCEQ02156 737 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 COX10Q12887 443 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 PDZK1IP1Q13113 114 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 SCGB2A2Q13296 93 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 MICAQ29983 383 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 HSP90B2PQ58FF3 399 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 MS4A13Q5J8X5 152 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 TCTEX1D4Q5JR98 221 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 LEG1Q6P5S2 330 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 HIPK1Q86Z02 1210 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 OR6T1Q8NGN1 323 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 RFESDQ8TAC1 157 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 SELENOMQ8WWX9 145 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 MCHR2Q969V1 340 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 ZBED6CLQ96FA7 236 aaPredicted RBP2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 WBP1Q96G27 269 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 DPH5Q9H2P9 285 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 KAT8Q9H7Z6 458 aaKnown RBP2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 ECT2Q9H8V3 914 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 POLD4Q9HCU8 107 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 TIGARQ9NQ88 270 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 CUTCQ9NTM9 273 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 DUS2Q9NX74 493 aaKnown RBP2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 CLEC5AQ9NY25 188 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 ZNF581Q9P0T4 197 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 RCOR3Q9P2K3 495 aaPredicted RBP2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 ISY1Q9ULR0 285 aaKnown RBP2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 FOXJ3Q9UPW0 622 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 KIF3AQ9Y496 699 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 TDRD15B5MCY1 1934 aaKnown RBP2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 ZCCHC6Q5VYS8 1495 aaKnown RBP2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 ATP8B3O60423 1300 aa2.89□□□□□ -1.95
HMGXB4-205ENST00000464480 NCAPD2Q15021 1401 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 TRBV7-9A0A0J9YWB2 115 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 RGSL1A5PLK6 1076 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 RNF222A6NCQ9 220 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 WASH3PC4AMC7 463 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 CLDN3O15551 220 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 PRAMEF12O95522 483 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 IGHV3-9P01782 118 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 PIGRP01833 764 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 CA3P07451 260 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 TSPAN8P19075 237 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 TNNI3P19429 210 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 PAICSP22234 425 aaKnown RBP2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 DPP4P27487 766 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 STK19P49842 368 aaPredicted RBP2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 METAP1P53582 386 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 HMGCS2P54868 508 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 ZNF33BQ06732 778 aa2.88□□□□□ -1.95
HMGXB4-205ENST00000464480 RAB35Q15286 201 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms