RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 TREX2Q9BQ50 279 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 GATA5Q9BWX5 397 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 TAS2R9Q9NYW1 312 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 OR10H1Q9Y4A9 318 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 PCDHGB3Q9Y5G1 929 aa17.59■□□□□ 0.41
CCHCR1-210ENST00000464012 DCHS2Q6V1P9 2916 aa17.58■□□□□ 0.41
CCHCR1-210ENST00000464012 OR6C70A6NIJ9 312 aa17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 MYO1GB0I1T2 1018 aa17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 FAM47E-STBD1D6RA91 191 aa17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 PLOD3O60568 738 aa17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 COQ9O75208 318 aa17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 IGFBP2P18065 325 aa17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 BMP7P18075 431 aa17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 IFFO1Q0D2I5 559 aa17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 SNTA1Q13424 505 aa17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 TMEM81Q6P7N7 255 aa17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 SEM1Q6ZVN7 128 aa17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 LARP4Q71RC2 724 aaKnown RBP eCLIP17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 PM20D2Q8IYS1 436 aa17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 OR4N2Q8NGD1 307 aa17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 GFM2Q969S9 779 aaKnown RBP17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 EFHD2Q96C19 240 aaPredicted RBP17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 NTNG2Q96CW9 530 aa17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 EGLN2Q96KS0 407 aa17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 DOCK7Q96N67 2140 aa17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 UGT2B28Q9BY64 529 aa17.58■□□□□ 0.4
CCHCR1-210ENST00000464012 SLC28A1O00337 649 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 AZIN1O14977 448 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 TSPAN2O60636 221 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 SPAG7O75391 227 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 TCEA1P23193 301 aaKnown RBP17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 VASNQ6EMK4 673 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 TRABD2AQ86V40 505 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 DMRTC2Q8IXT2 367 aaPredicted RBP17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 RIBC1Q8N443 379 aaPredicted RBP17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 TNIP2Q8NFZ5 429 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 OR14L1PQ8NHC6 308 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 FAM76AQ8TAV0 307 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 ABTB1Q969K4 478 aaPredicted RBP17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 SLC35A4Q96G79 324 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 FAM111AQ96PZ2 611 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 TRIB1Q96RU8 372 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 MECRQ9BV79 373 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 PRDM14Q9GZV8 571 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 STMN4Q9H169 189 aaPredicted RBP17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 GLIPR2Q9H4G4 154 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 LRTM1Q9HBL6 345 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 DDX18Q9NVP1 670 aaKnown RBP17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 MKS1Q9NXB0 559 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 SLC17A7Q9P2U7 560 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 EXO1Q9UQ84 846 aaKnown RBP17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 CCL27Q9Y4X3 112 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 WIF1Q9Y5W5 379 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 ADGRG4Q8IZF6 3080 aa17.57■□□□□ 0.4
CCHCR1-210ENST00000464012 HSPB2A8KAH6 182 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 AHRRA9YTQ3 701 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 RGS14O43566 566 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 TRIM13O60858 407 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 ABCB7O75027 752 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 CHRNGP07510 517 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 LINC00032P0C843 101 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 BMP5P22003 454 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 TACR1P25103 407 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 ALDH3A1P30838 453 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 EFR3AQ14156 821 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 HSPB2Q16082 182 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 SLC25A35Q3KQZ1 300 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 OR5M10Q6IEU7 315 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 ANKRD26P1Q6NSI1 321 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 IKBIPQ70UQ0 350 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 LACC1Q8IV20 430 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 CLYBLQ8N0X4 340 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 BANPQ8N9N5 519 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 WDSUB1Q8N9V3 476 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 NAXEQ8NCW5 288 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 OR2T11Q8NH01 316 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 MCCC2Q9HCC0 563 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 C1orf109Q9NX04 203 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 ITGB1BP2Q9UKP3 347 aa17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 V9GYY5 206 aaPredicted RBP17.56■□□□□ 0.4
CCHCR1-210ENST00000464012 PDZD2O15018 2839 aa17.55■□□□□ 0.4
CCHCR1-210ENST00000464012 SCO2O43819 266 aa17.55■□□□□ 0.4
CCHCR1-210ENST00000464012 EPPINO95925 133 aa17.55■□□□□ 0.4
CCHCR1-210ENST00000464012 CHEK2O96017 543 aa17.55■□□□□ 0.4
CCHCR1-210ENST00000464012 NUDT17P0C025 328 aa17.55■□□□□ 0.4
CCHCR1-210ENST00000464012 GCKP35557 465 aa17.55■□□□□ 0.4
CCHCR1-210ENST00000464012 RPL38P63173 70 aaKnown RBP17.55■□□□□ 0.4
CCHCR1-210ENST00000464012 PSG6Q00889 435 aa17.55■□□□□ 0.4
CCHCR1-210ENST00000464012 HSPB3Q12988 150 aa17.55■□□□□ 0.4
CCHCR1-210ENST00000464012 MYBPHQ13203 477 aa17.55■□□□□ 0.4
CCHCR1-210ENST00000464012 SNTB1Q13884 538 aaKnown RBP17.55■□□□□ 0.4
CCHCR1-210ENST00000464012 KIAA0040Q15053 153 aa17.55■□□□□ 0.4
CCHCR1-210ENST00000464012 GALNTL6Q49A17 601 aa17.55■□□□□ 0.4
CCHCR1-210ENST00000464012 NHSL2Q5HYW2 709 aa17.55■□□□□ 0.4
CCHCR1-210ENST00000464012 DDIASQ8IXT1 998 aa17.55■□□□□ 0.4
CCHCR1-210ENST00000464012 RELL2Q8NC24 303 aaPredicted RBP17.55■□□□□ 0.4
CCHCR1-210ENST00000464012 CLHC1Q8NHS4 586 aa17.55■□□□□ 0.4
CCHCR1-210ENST00000464012 AGR3Q8TD06 166 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms