RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 BIKQ13323 160 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 HLA-DQA1Q5Y7H0 255 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 FAM180BQ6P0A1 224 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 ZNF474Q6S9Z5 364 aaPredicted RBP14.21□□□□□ -0.13
SND1-203ENST00000463020 ZNF550Q7Z398 422 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 WDR20Q8TBZ3 569 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 WNT2BQ93097 391 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 UCN2Q96RP3 112 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 PIP5K1AQ99755 562 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 OSBPL11Q9BXB4 747 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 OR2B2Q9GZK3 357 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 OPN3Q9H1Y3 402 aaPredicted RBP14.21□□□□□ -0.13
SND1-203ENST00000463020 METTL7AQ9H8H3 244 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 LYARQ9NX58 379 aaKnown RBP14.21□□□□□ -0.13
SND1-203ENST00000463020 RNF11Q9Y3C5 154 aa14.21□□□□□ -0.13
SND1-203ENST00000463020 TCRBV9S1A1TA0A576 114 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 TMEM120BA0PK00 339 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 FAM159BA6NKW6 160 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 POC1B-GALNT4F8VUJ3 575 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 PLOD2O00469 737 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 ARHGEF9O43307 516 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 KERAO60938 352 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 VIMP08670 466 aaKnown RBP14.2□□□□□ -0.14
SND1-203ENST00000463020 GPX6P59796 221 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 SF3B4Q15427 424 aaKnown RBP eCLIP14.2□□□□□ -0.14
SND1-203ENST00000463020 ACKR1Q16570 336 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 CPSF6Q16630 551 aaKnown RBP eCLIP14.2□□□□□ -0.14
SND1-203ENST00000463020 OR52E8Q6IFG1 317 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 CYP20A1Q6UW02 462 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 ANKS4BQ8N8V4 417 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 OR14L1PQ8NHC6 308 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 IGFBPL1Q8WX77 278 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 STARD4Q96DR4 205 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 OMA1Q96E52 524 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 TSPAN17Q96FV3 270 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 CDK15Q96Q40 435 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 CCL19Q99731 98 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 NSMCE4AQ9NXX6 385 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 PSMC3IPQ9P2W1 217 aaPredicted RBP14.2□□□□□ -0.14
SND1-203ENST00000463020 PACSIN3Q9UKS6 424 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 EIF3LQ9Y262 564 aaKnown RBP14.2□□□□□ -0.14
SND1-203ENST00000463020 TSC22D4Q9Y3Q8 395 aa14.2□□□□□ -0.14
SND1-203ENST00000463020 FAM171A2A8MVW0 826 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 CAPN14A8MX76 684 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 H0YC42 278 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 H0YIV9 168 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 CPMP14384 443 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 EPB42P16452 691 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 KRT15P19012 456 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 NT5EP21589 574 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 PTX3P26022 381 aaPredicted RBP14.19□□□□□ -0.14
SND1-203ENST00000463020 STX2P32856 288 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 TMED10P49755 219 aaKnown RBP14.19□□□□□ -0.14
SND1-203ENST00000463020 XKP51811 444 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 TPD52P55327 224 aaPredicted RBP14.19□□□□□ -0.14
SND1-203ENST00000463020 CLDN15P56746 228 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 CBLBQ13191 982 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 CAPRIN1Q14444 709 aaKnown RBP14.19□□□□□ -0.14
SND1-203ENST00000463020 LTB4RQ15722 352 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 KBTBD12Q3ZCT8 623 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 OR5M10Q6IEU7 315 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 CCDC121Q6ZUS5 278 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 BTLAQ7Z6A9 289 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 CENPLQ8N0S6 344 aaPredicted RBP14.19□□□□□ -0.14
SND1-203ENST00000463020 ANKRD42Q8N9B4 389 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 CCDC197Q8NCU1 140 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 C7orf57Q8NEG2 295 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 STAG3L4Q8TBR4 150 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 KCTD4Q8WVF5 259 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 NANOS1Q8WY41 292 aaKnown RBP14.19□□□□□ -0.14
SND1-203ENST00000463020 NXNL1Q96CM4 212 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 TM9SF2Q99805 663 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 ANKRA2Q9H9E1 313 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 MAT2BQ9NZL9 334 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 TBK1Q9UHD2 729 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 ROS1P08922 2347 aa14.19□□□□□ -0.14
SND1-203ENST00000463020 ANK2Q01484 3957 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 PRAMEF25A6NGN4 478 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 CASKO14936 926 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 HCRTR2O43614 444 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 SMNDC1O75940 238 aaKnown RBP eCLIP14.18□□□□□ -0.14
SND1-203ENST00000463020 SIX3O95343 332 aaPredicted RBP14.18□□□□□ -0.14
SND1-203ENST00000463020 CBX7O95931 251 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 GSTA2P09210 222 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 ZNF708P17019 499 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 CRYGSP22914 178 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 PIK3R1P27986 724 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 SLC18A1P54219 525 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 NR1H2P55055 460 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 NRG3P56975 720 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 B3GALT5-AS1P59052 145 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 CUL3Q13618 768 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 PRICKLE4Q2TBC4 344 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 TMEM81Q6P7N7 255 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 PRSS57Q6UWY2 283 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 GOLGA7Q7Z5G4 137 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 NUDT13Q86X67 352 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 C17orf47Q8NEP4 570 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 ADCY4Q8NFM4 1077 aa14.18□□□□□ -0.14
SND1-203ENST00000463020 SPATA3Q8NHX4 192 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms