RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 RBBP4Q09028 425 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 TMED1Q13445 227 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 RUNX2Q13950 521 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 SLC9A5Q14940 896 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 RGNQ15493 299 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 SMYD1Q8NB12 490 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 SGCDQ92629 289 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 GABARAPL3Q9BY60 117 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 KRT84Q9NSB2 600 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 PDP1Q9P0J1 537 aaPredicted RBP16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 hCG_2039718K7EN88 272 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 GP2P55259 537 aaKnown RBP16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 ZNF763Q0D2J5 394 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 PPP1R8Q12972 351 aaKnown RBP16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 MAD2L1BPQ15013 274 aaPredicted RBP16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 SYT16Q17RD7 645 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 NIPAL1Q6NVV3 410 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 C16orf78Q8WTQ4 265 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 FAR1Q8WVX9 515 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 RORBQ92753 470 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 COL26A1Q96A83 441 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 MTERF3Q96E29 417 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 HSPBAP1Q96EW2 488 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 MVB12AQ96EY5 273 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 PLEKHA8Q96JA3 519 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 C7orf34Q96L11 122 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 CSF3RQ99062 836 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 MAPKAP1Q9BPZ7 522 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 ZPBPQ9BS86 351 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 DOHHQ9BU89 302 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 YIPF2Q9BWQ6 316 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 REEP4Q9H6H4 257 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 NECTIN3Q9NQS3 549 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 THUMPD1Q9NXG2 353 aaKnown RBP16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 FOXJ2Q9P0K8 574 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 PCDHGB3Q9Y5G1 929 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 TEX51A0A1B0GUA7 166 aa16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 H0YIG0 161 aa16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 BCAS1O75363 584 aaPredicted RBP16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 ACVR2AP27037 513 aa16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 RANBP1P43487 201 aa16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 LIM2P55344 173 aa16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 TAS2R50P59544 299 aa16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 PDE7AQ13946 482 aa16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 IQCCQ4KMZ1 466 aa16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 ARHGAP40Q5TG30 622 aa16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 VTCN1Q7Z7D3 282 aa16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 GALNT5Q7Z7M9 940 aa16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 CA13Q8N1Q1 262 aa16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 PARP8Q8N3A8 854 aa16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 CNIH3Q8TBE1 160 aa16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 ZNF347Q96SE7 839 aa16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 ZNF304Q9HCX3 659 aa16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 MYNNQ9NPC7 610 aa16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 PCDHGA3Q9Y5H0 932 aa16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 SDK2Q58EX2 2172 aa16.89■□□□□ 0.29
ATPAF2-202ENST00000462733 ADAMDEC1O15204 470 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 CHST10O43529 356 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 STK17BO94768 372 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 FBLP22087 321 aaKnown RBP16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 RORAP35398 523 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 ID4P47928 161 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 BMXP51813 675 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 KCNJ10P78508 379 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 TEKQ02763 1124 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 EMX1Q04741 257 aaPredicted RBP16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 FADDQ13158 208 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 SYT6Q5T7P8 510 aaPredicted RBP16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 MRM1Q6IN84 353 aaKnown RBP16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 GALNT6Q8NCL4 622 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 OR4A15Q8NGL6 344 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 OR10Q1Q8NGQ4 319 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 TM4SF18Q96CE8 201 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 BARD1Q99728 777 aaKnown RBP16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 DPH2Q9BQC3 489 aaPredicted RBP16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 DGCR6LQ9BY27 220 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 LYARQ9NX58 379 aaKnown RBP16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 TEX10Q9NXF1 929 aaPredicted RBP16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 DAPP1Q9UN19 280 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 ERVK-11Q9UQG0 969 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 ATG4BQ9Y4P1 393 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 ASB4Q9Y574 426 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 PCDHGA10Q9Y5H3 936 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 AHCTF1Q8WYP5 2266 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 CCDC88CQ9P219 2028 aa16.88■□□□□ 0.29
ATPAF2-202ENST00000462733 A8MVJ9 347 aa16.87■□□□□ 0.29
ATPAF2-202ENST00000462733 PTGES3LE9PB15 166 aa16.87■□□□□ 0.29
ATPAF2-202ENST00000462733 MEN1O00255 615 aa16.87■□□□□ 0.29
ATPAF2-202ENST00000462733 IL3P08700 152 aa16.87■□□□□ 0.29
ATPAF2-202ENST00000462733 SPINK2P20155 84 aa16.87■□□□□ 0.29
ATPAF2-202ENST00000462733 EFNA1P20827 205 aaPredicted RBP16.87■□□□□ 0.29
ATPAF2-202ENST00000462733 RBMS1P29558 406 aaKnown RBP16.87■□□□□ 0.29
ATPAF2-202ENST00000462733 SHC2P98077 582 aa16.87■□□□□ 0.29
ATPAF2-202ENST00000462733 GAB1Q13480 694 aa16.87■□□□□ 0.29
ATPAF2-202ENST00000462733 CTF1Q16619 201 aa16.87■□□□□ 0.29
ATPAF2-202ENST00000462733 IKBIPQ70UQ0 350 aa16.87■□□□□ 0.29
ATPAF2-202ENST00000462733 PRSS48Q7RTY5 328 aa16.87■□□□□ 0.29
ATPAF2-202ENST00000462733 SLC30A8Q8IWU4 369 aa16.87■□□□□ 0.29
ATPAF2-202ENST00000462733 MMP21Q8N119 569 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms