RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 C16orf58Q96GQ5 468 aa12.74□□□□□ -0.37
CHRD-209ENST00000461120 LCORQ96JN0 433 aaPredicted RBP12.74□□□□□ -0.37
CHRD-209ENST00000461120 BTBD9Q96Q07 612 aa12.74□□□□□ -0.37
CHRD-209ENST00000461120 RASL10BQ96S79 203 aa12.74□□□□□ -0.37
CHRD-209ENST00000461120 SLC35A5Q9BS91 424 aa12.74□□□□□ -0.37
CHRD-209ENST00000461120 CCDC106Q9BWC9 280 aa12.74□□□□□ -0.37
CHRD-209ENST00000461120 PAIP1Q9H074 479 aaKnown RBP12.74□□□□□ -0.37
CHRD-209ENST00000461120 NXF5Q9H1B4 397 aaKnown RBP12.74□□□□□ -0.37
CHRD-209ENST00000461120 EPS8L2Q9H6S3 715 aa12.74□□□□□ -0.37
CHRD-209ENST00000461120 EQTNQ9NQ60 294 aa12.74□□□□□ -0.37
CHRD-209ENST00000461120 GPATCH2Q9NW75 528 aa12.74□□□□□ -0.37
CHRD-209ENST00000461120 ABI3Q9P2A4 366 aa12.74□□□□□ -0.37
CHRD-209ENST00000461120 GPR55Q9Y2T6 319 aaPredicted RBP12.74□□□□□ -0.37
CHRD-209ENST00000461120 NDUFAF1Q9Y375 327 aa12.74□□□□□ -0.37
CHRD-209ENST00000461120 ZNF451Q9Y4E5 1061 aa12.74□□□□□ -0.37
CHRD-209ENST00000461120 CELSR1Q9NYQ6 3014 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 A0A096LPI6 279 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 FRG2CA6NGY1 282 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 TTC36A6NLP5 189 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 NDUFAB1O14561 156 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 ANGPT2O15123 496 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 ANP32DO95626 131 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 WDPCPO95876 746 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 HMGN2P05204 90 aaKnown RBP12.73□□□□□ -0.37
CHRD-209ENST00000461120 ZCCHC18P0CG32 403 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 CT45A8P0DMV1 189 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 CT45A9P0DMV2 189 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 ACP2P11117 423 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 TRHRP34981 398 aaPredicted RBP12.73□□□□□ -0.37
CHRD-209ENST00000461120 MAP3K8P41279 467 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 PRIM2P49643 509 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 ST13P50502 369 aaKnown RBP12.73□□□□□ -0.37
CHRD-209ENST00000461120 SSR4P51571 173 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 CORO7P57737 925 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 PSG6Q00889 435 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 NNATQ16517 81 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 GTDC1Q4AE62 458 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 CT45A2Q5DJT8 189 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 EXOSC6Q5RKV6 272 aaKnown RBP12.73□□□□□ -0.37
CHRD-209ENST00000461120 LRIF1Q5T3J3 769 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 ZNF468Q5VIY5 522 aaPredicted RBP12.73□□□□□ -0.37
CHRD-209ENST00000461120 ZCCHC12Q6PEW1 402 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 BHLHB9Q6PI77 547 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 IGFL3Q6UXB1 125 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 C6orf120Q7Z4R8 191 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 WDR53Q7Z5U6 358 aaPredicted RBP12.73□□□□□ -0.37
CHRD-209ENST00000461120 RETREG3Q86VR2 466 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 SNX32Q86XE0 403 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 TREML1Q86YW5 311 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 TAGAPQ8N103 731 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 SLC15A4Q8N697 577 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 TRIML2Q8N7C3 387 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 CDRT4Q8N9R6 151 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 SLC22A8Q8TCC7 542 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 BCAS4Q8TDM0 211 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 LMF2Q9BU23 707 aaKnown RBP12.73□□□□□ -0.37
CHRD-209ENST00000461120 RNF32Q9H0A6 362 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 SLC6A13Q9NSD5 602 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 PLA2G3Q9NZ20 509 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 LEF1Q9UJU2 399 aaPredicted RBP12.73□□□□□ -0.37
CHRD-209ENST00000461120 TP53TG5Q9Y2B4 290 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 CSMD1Q96PZ7 3565 aa12.73□□□□□ -0.37
CHRD-209ENST00000461120 TNRC6AQ8NDV7 1962 aaKnown RBP12.72□□□□□ -0.37
CHRD-209ENST00000461120 PDZD2O15018 2839 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 MED13LQ71F56 2210 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 FBP2O00757 339 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 CDK2AP1O14519 115 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 TO15178 435 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 ACOX3O15254 700 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 DCTN3O75935 186 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 NKX2-2O95096 273 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 F10P00742 488 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 HOXB9P17482 250 aaPredicted RBP12.72□□□□□ -0.37
CHRD-209ENST00000461120 CHI3L1P36222 383 aaPredicted RBP12.72□□□□□ -0.37
CHRD-209ENST00000461120 SOX3P41225 446 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 HLCSP50747 726 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 TUBA3CQ13748 450 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 LASP1Q14847 261 aaKnown RBP12.72□□□□□ -0.37
CHRD-209ENST00000461120 ZNHIT3Q15649 155 aaPredicted RBP12.72□□□□□ -0.37
CHRD-209ENST00000461120 LACTB2Q53H82 288 aaPredicted RBP12.72□□□□□ -0.37
CHRD-209ENST00000461120 SAXO2Q658L1 398 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 CDC73Q6P1J9 531 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 TUBA3EQ6PEY2 450 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 LYPD8Q6UX82 237 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 ASB18Q6ZVZ8 466 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 SLC44A2Q8IWA5 706 aaPredicted RBP12.72□□□□□ -0.37
CHRD-209ENST00000461120 DPP10Q8N608 796 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 TMEM156Q8N614 296 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 SLC16A11Q8NCK7 471 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 FBXO30Q8TB52 745 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 ZFP90Q8TF47 636 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 ASB15Q8WXK1 588 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 TM9SF4Q92544 642 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 HAS2Q92819 552 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 NEURL3Q96EH8 262 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 HSPBAP1Q96EW2 488 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 SLC35G5Q96KT7 338 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 UTP23Q9BRU9 249 aaKnown RBP12.72□□□□□ -0.37
CHRD-209ENST00000461120 YIPF4Q9BSR8 244 aa12.72□□□□□ -0.37
CHRD-209ENST00000461120 ACTRT3Q9BYD9 372 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms