RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 COL9A2Q14055 689 aaPredicted RBP13.97□□□□□ -0.17
PTPRU-205ENST00000460170 TBCEQ15813 527 aaPredicted RBP13.97□□□□□ -0.17
PTPRU-205ENST00000460170 XKR7Q5GH72 579 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 CDRT4Q8N9R6 151 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 OR52E2Q8NGJ4 325 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 TUBGCP6Q96RT7 1819 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 FXYD6-FXYD2A0A087WZ82 144 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 EIF1AYO14602 144 aaKnown RBP13.97□□□□□ -0.17
PTPRU-205ENST00000460170 TAPBPO15533 448 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 ZNF432O94892 652 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 S100A9P06702 114 aaKnown RBP13.97□□□□□ -0.17
PTPRU-205ENST00000460170 ARAFP10398 606 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 CPOQ8IVL8 374 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 ASCC1Q8N9N2 400 aaKnown RBP13.97□□□□□ -0.17
PTPRU-205ENST00000460170 CHFRQ96EP1 664 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 PRRC1Q96M27 445 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 CNN2Q99439 309 aaKnown RBP13.97□□□□□ -0.17
PTPRU-205ENST00000460170 CMKLR1Q99788 373 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 FXYD6Q9H0Q3 95 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 NANSQ9NR45 359 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 L7N2F9 121 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 AP1G1O43747 822 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 ENDOUP21128 410 aaKnown RBP13.97□□□□□ -0.17
PTPRU-205ENST00000460170 MAP4K2Q12851 820 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 ELOAQ14241 798 aaKnown RBP13.97□□□□□ -0.17
PTPRU-205ENST00000460170 TMED4Q7Z7H5 227 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 ZNF440Q8IYI8 595 aa13.97□□□□□ -0.17
PTPRU-205ENST00000460170 C17orf113A0A1B0GUU1 675 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 CACNG3O60359 315 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 UPK1BO75841 260 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 FCER2P06734 321 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 CA3P07451 260 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 SPARCP09486 303 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 AFMIDQ63HM1 303 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 THOC7Q6I9Y2 204 aaKnown RBP13.96□□□□□ -0.17
PTPRU-205ENST00000460170 HMBOX1Q6NT76 420 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 RNF111Q6ZNA4 994 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 GDPD1Q8N9F7 314 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 TGM7Q96PF1 710 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 IRF2BPLQ9H1B7 796 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 CHMP1AQ9HD42 196 aaPredicted RBP13.96□□□□□ -0.17
PTPRU-205ENST00000460170 SCML1Q9UN30 329 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 HMGA1P17096 107 aaKnown RBP13.96□□□□□ -0.17
PTPRU-205ENST00000460170 S1PR1P21453 382 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 HNRNPA2B1P22626 353 aaKnown RBP13.96□□□□□ -0.17
PTPRU-205ENST00000460170 RGS6P49758 472 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 XKRXQ6PP77 449 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 DTX3Q8N9I9 347 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 OR52E1Q8NGJ3 308 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 P2RY12Q9H244 342 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 ABI3Q9P2A4 366 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 PCDHGB2Q9Y5G2 931 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 SDK1Q7Z5N4 2213 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 SOX3P41225 446 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 PUDPQ08623 228 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 PHF19Q5T6S3 580 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 FBXO46Q6PJ61 603 aaPredicted RBP13.96□□□□□ -0.17
PTPRU-205ENST00000460170 TMEM156Q8N614 296 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 INO80EQ8NBZ0 244 aaPredicted RBP13.96□□□□□ -0.17
PTPRU-205ENST00000460170 OR4K13Q8NH42 304 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 RPLP0P6Q8NHW5 317 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 DAZLQ92904 295 aaKnown RBP13.96□□□□□ -0.17
PTPRU-205ENST00000460170 GAL3ST3Q96A11 431 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 PEX11GQ96HA9 241 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 MACROD1Q9BQ69 325 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 PIAS3Q9Y6X2 628 aa13.96□□□□□ -0.17
PTPRU-205ENST00000460170 C12orf71A8MTZ7 269 aa13.96□□□□□ -0.18
PTPRU-205ENST00000460170 WASH3PC4AMC7 463 aa13.96□□□□□ -0.18
PTPRU-205ENST00000460170 ARHGDIBP52566 201 aa13.96□□□□□ -0.18
PTPRU-205ENST00000460170 HHEXQ03014 270 aa13.96□□□□□ -0.18
PTPRU-205ENST00000460170 SPCS2Q15005 226 aa13.96□□□□□ -0.18
PTPRU-205ENST00000460170 BTBD16Q32M84 506 aa13.96□□□□□ -0.18
PTPRU-205ENST00000460170 GLT8D1Q68CQ7 371 aa13.96□□□□□ -0.18
PTPRU-205ENST00000460170 SLCO4C1Q6ZQN7 724 aa13.96□□□□□ -0.18
PTPRU-205ENST00000460170 DCDC5Q6ZRR9 648 aa13.96□□□□□ -0.18
PTPRU-205ENST00000460170 ZNF765Q7L2R6 523 aa13.96□□□□□ -0.18
PTPRU-205ENST00000460170 OR6N1Q8NGY5 312 aa13.96□□□□□ -0.18
PTPRU-205ENST00000460170 MROQ9BYG7 248 aa13.96□□□□□ -0.18
PTPRU-205ENST00000460170 MEMO1Q9Y316 297 aa13.96□□□□□ -0.18
PTPRU-205ENST00000460170 AGAP5A6NIR3 686 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 PCP4L1A6NKN8 68 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 PGAM2P15259 253 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 HIST1H1TP22492 207 aaPredicted RBP13.95□□□□□ -0.18
PTPRU-205ENST00000460170 ARRB2P32121 409 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 SLC6A11P48066 632 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 ZNF41P51814 821 aaPredicted RBP13.95□□□□□ -0.18
PTPRU-205ENST00000460170 PSMA6P60900 246 aaKnown RBP13.95□□□□□ -0.18
PTPRU-205ENST00000460170 OC90Q02509 493 aaPredicted RBP13.95□□□□□ -0.18
PTPRU-205ENST00000460170 RELAQ04206 551 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 PIAS4Q8N2W9 510 aaPredicted RBP13.95□□□□□ -0.18
PTPRU-205ENST00000460170 LNX2Q8N448 690 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 WFDC5Q8TCV5 224 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 FGF13Q92913 245 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 DPH1Q9BZG8 443 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 CUEDC1Q9NWM3 386 aaPredicted RBP13.95□□□□□ -0.18
PTPRU-205ENST00000460170 DNMT3BQ9UBC3 853 aaKnown RBP13.95□□□□□ -0.18
PTPRU-205ENST00000460170 C19orf25Q9UFG5 118 aaPredicted RBP13.95□□□□□ -0.18
PTPRU-205ENST00000460170 SLC7A7Q9UM01 511 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 A0A1B0GVI7 797 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 RLN2P04090 185 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms