RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 TMEM198Q66K66 360 aa19.02■□□□□ 0.64
VARS-218ENST00000459667 DESI1Q6ICB0 168 aa19.02■□□□□ 0.64
VARS-218ENST00000459667 SLC44A2Q8IWA5 706 aaPredicted RBP19.02■□□□□ 0.64
VARS-218ENST00000459667 OR7A2PQ8NGA2 310 aa19.02■□□□□ 0.64
VARS-218ENST00000459667 DYDC1Q8WWB3 177 aa19.02■□□□□ 0.64
VARS-218ENST00000459667 NODALQ96S42 347 aa19.02■□□□□ 0.64
VARS-218ENST00000459667 NUF2Q9BZD4 464 aa19.02■□□□□ 0.64
VARS-218ENST00000459667 METTL7AQ9H8H3 244 aa19.02■□□□□ 0.64
VARS-218ENST00000459667 AKTIPQ9H8T0 292 aa19.02■□□□□ 0.64
VARS-218ENST00000459667 ACSS1Q9NUB1 689 aaPredicted RBP19.02■□□□□ 0.64
VARS-218ENST00000459667 NOP53Q9NZM5 478 aaKnown RBP19.02■□□□□ 0.64
VARS-218ENST00000459667 B4GALT7Q9UBV7 327 aa19.02■□□□□ 0.64
VARS-218ENST00000459667 OR10H1Q9Y4A9 318 aa19.02■□□□□ 0.64
VARS-218ENST00000459667 LIPGQ9Y5X9 500 aa19.02■□□□□ 0.64
VARS-218ENST00000459667 UQCRHLA0A096LP55 91 aa19.01■□□□□ 0.63
VARS-218ENST00000459667 A1L4Q6 167 aa19.01■□□□□ 0.63
VARS-218ENST00000459667 PRRG2O14669 202 aa19.01■□□□□ 0.63
VARS-218ENST00000459667 ZG16O60844 167 aa19.01■□□□□ 0.63
VARS-218ENST00000459667 SNNO75324 88 aaPredicted RBP19.01■□□□□ 0.63
VARS-218ENST00000459667 SNX4O95219 450 aa19.01■□□□□ 0.63
VARS-218ENST00000459667 IGHG3P01860 377 aa19.01■□□□□ 0.63
VARS-218ENST00000459667 TPOP07202 933 aa19.01■□□□□ 0.63
VARS-218ENST00000459667 CELA3AP09093 270 aa19.01■□□□□ 0.63
VARS-218ENST00000459667 G6PDP11413 515 aa19.01■□□□□ 0.63
VARS-218ENST00000459667 EFNA1P20827 205 aaPredicted RBP19.01■□□□□ 0.63
VARS-218ENST00000459667 KRT20P35900 424 aa19.01■□□□□ 0.63
VARS-218ENST00000459667 MASP1P48740 699 aa19.01■□□□□ 0.63
VARS-218ENST00000459667 CDK9P50750 372 aaKnown RBP19.01■□□□□ 0.63
VARS-218ENST00000459667 PACS2Q86VP3 889 aa19.01■□□□□ 0.63
VARS-218ENST00000459667 FAM57AQ8TBR7 257 aa19.01■□□□□ 0.63
VARS-218ENST00000459667 SLC35A4Q96G79 324 aa19.01■□□□□ 0.63
VARS-218ENST00000459667 COL21A1Q96P44 957 aa19.01■□□□□ 0.63
VARS-218ENST00000459667 ASIC5Q9NY37 505 aa19.01■□□□□ 0.63
VARS-218ENST00000459667 USP9YO00507 2555 aaPredicted RBP19.01■□□□□ 0.63
VARS-218ENST00000459667 ZNF407Q9C0G0 2248 aa19.01■□□□□ 0.63
VARS-218ENST00000459667 SPTAN1Q13813 2472 aaKnown RBP19■□□□□ 0.63
VARS-218ENST00000459667 DOPEY1Q5JWR5 2465 aa19■□□□□ 0.63
VARS-218ENST00000459667 MYO7BQ6PIF6 2116 aa19■□□□□ 0.63
VARS-218ENST00000459667 OR6C70A6NIJ9 312 aa19■□□□□ 0.63
VARS-218ENST00000459667 SLCO1B7G3V0H7 640 aa19■□□□□ 0.63
VARS-218ENST00000459667 KLF11O14901 512 aa19■□□□□ 0.63
VARS-218ENST00000459667 ABCB7O75027 752 aa19■□□□□ 0.63
VARS-218ENST00000459667 SASH3O75995 380 aa19■□□□□ 0.63
VARS-218ENST00000459667 LAMP1P11279 417 aa19■□□□□ 0.63
VARS-218ENST00000459667 ESRRAP11474 423 aaPredicted RBP19■□□□□ 0.63
VARS-218ENST00000459667 PRPS1L1P21108 318 aa19■□□□□ 0.63
VARS-218ENST00000459667 IL12BP29460 328 aa19■□□□□ 0.63
VARS-218ENST00000459667 PPP2R2AP63151 447 aa19■□□□□ 0.63
VARS-218ENST00000459667 SLC10A1Q14973 349 aa19■□□□□ 0.63
VARS-218ENST00000459667 ZNHIT3Q15649 155 aaPredicted RBP19■□□□□ 0.63
VARS-218ENST00000459667 CPTPQ5TA50 214 aa19■□□□□ 0.63
VARS-218ENST00000459667 MTFR2Q6P444 385 aa19■□□□□ 0.63
VARS-218ENST00000459667 TMEM81Q6P7N7 255 aa19■□□□□ 0.63
VARS-218ENST00000459667 CD163Q86VB7 1156 aa19■□□□□ 0.63
VARS-218ENST00000459667 KRTCAP2Q8N6L1 136 aa19■□□□□ 0.63
VARS-218ENST00000459667 OR4N2Q8NGD1 307 aa19■□□□□ 0.63
VARS-218ENST00000459667 TMCO6Q96DC7 493 aa19■□□□□ 0.63
VARS-218ENST00000459667 CCDC120Q96HB5 630 aa19■□□□□ 0.63
VARS-218ENST00000459667 OSBPL11Q9BXB4 747 aa19■□□□□ 0.63
VARS-218ENST00000459667 LDAHQ9H6V9 325 aa19■□□□□ 0.63
VARS-218ENST00000459667 MEAF6Q9HAF1 191 aa19■□□□□ 0.63
VARS-218ENST00000459667 EQTNQ9NQ60 294 aa19■□□□□ 0.63
VARS-218ENST00000459667 ATAD3AQ9NVI7 634 aa19■□□□□ 0.63
VARS-218ENST00000459667 QPCTLQ9NXS2 382 aa19■□□□□ 0.63
VARS-218ENST00000459667 KLRF1Q9NZS2 232 aa19■□□□□ 0.63
VARS-218ENST00000459667 NCKAP5O14513 1909 aa19■□□□□ 0.63
VARS-218ENST00000459667 ICE1Q9Y2F5 2266 aa18.99■□□□□ 0.63
VARS-218ENST00000459667 PRAMEF25A6NGN4 478 aa18.99■□□□□ 0.63
VARS-218ENST00000459667 TSPAN2O60636 221 aa18.99■□□□□ 0.63
VARS-218ENST00000459667 GDF1P27539 372 aa18.99■□□□□ 0.63
VARS-218ENST00000459667 EFR3AQ14156 821 aa18.99■□□□□ 0.63
VARS-218ENST00000459667 SLC30A6Q6NXT4 461 aa18.99■□□□□ 0.63
VARS-218ENST00000459667 LARP4Q71RC2 724 aaKnown RBP eCLIP18.99■□□□□ 0.63
VARS-218ENST00000459667 TRILQ7L0X0 811 aa18.99■□□□□ 0.63
VARS-218ENST00000459667 SZRD1Q7Z422 152 aa18.99■□□□□ 0.63
VARS-218ENST00000459667 WDR53Q7Z5U6 358 aaPredicted RBP18.99■□□□□ 0.63
VARS-218ENST00000459667 DOLPP1Q86YN1 238 aa18.99■□□□□ 0.63
VARS-218ENST00000459667 LRRC8CQ8TDW0 803 aa18.99■□□□□ 0.63
VARS-218ENST00000459667 EFHD2Q96C19 240 aaPredicted RBP18.99■□□□□ 0.63
VARS-218ENST00000459667 TMEM41AQ96HV5 264 aa18.99■□□□□ 0.63
VARS-218ENST00000459667 ADOQ96SZ5 270 aa18.99■□□□□ 0.63
VARS-218ENST00000459667 PRPF18Q99633 342 aaKnown RBP18.99■□□□□ 0.63
VARS-218ENST00000459667 LMF2Q9BU23 707 aaKnown RBP18.99■□□□□ 0.63
VARS-218ENST00000459667 EXO5Q9H790 373 aa18.99■□□□□ 0.63
VARS-218ENST00000459667 Q9N2J8 555 aa18.99■□□□□ 0.63
VARS-218ENST00000459667 PLEKHB1Q9UF11 243 aaPredicted RBP18.99■□□□□ 0.63
VARS-218ENST00000459667 SPTBN1Q01082 2364 aaKnown RBP18.99■□□□□ 0.63
VARS-218ENST00000459667 A0A1B0GVC2 190 aa18.98■□□□□ 0.63
VARS-218ENST00000459667 A0A1W2PRB8 838 aa18.98■□□□□ 0.63
VARS-218ENST00000459667 TRPC5OSA6NMA1 111 aa18.98■□□□□ 0.63
VARS-218ENST00000459667 GP1BBP13224 206 aa18.98■□□□□ 0.63
VARS-218ENST00000459667 LBPP18428 481 aa18.98■□□□□ 0.63
VARS-218ENST00000459667 PTGDSP41222 190 aa18.98■□□□□ 0.63
VARS-218ENST00000459667 MAN2A2P49641 1150 aa18.98■□□□□ 0.63
VARS-218ENST00000459667 PNLIPRP2P54317 469 aa18.98■□□□□ 0.63
VARS-218ENST00000459667 PRKAG1P54619 331 aa18.98■□□□□ 0.63
VARS-218ENST00000459667 CLDN8P56748 225 aa18.98■□□□□ 0.63
VARS-218ENST00000459667 SNTA1Q13424 505 aa18.98■□□□□ 0.63
VARS-218ENST00000459667 MLC1Q15049 377 aa18.98■□□□□ 0.63
VARS-218ENST00000459667 FNDC7Q5VTL7 733 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms