RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 PCTPQ9UKL6 214 aa9.44□□□□□ -0.9
HDLBP-227ENST00000458564 PSME2Q9UL46 239 aa9.44□□□□□ -0.9
HDLBP-227ENST00000458564 GPR55Q9Y2T6 319 aaPredicted RBP9.44□□□□□ -0.9
HDLBP-227ENST00000458564 A0A096LPK6 155 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 KIAA1324LA8MWY0 1029 aaPredicted RBP9.43□□□□□ -0.9
HDLBP-227ENST00000458564 B4DXG7 233 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 ZIC3O60481 467 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 TSPAN2O60636 221 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 ERAL1O75616 437 aaKnown RBP9.43□□□□□ -0.9
HDLBP-227ENST00000458564 BCAS2O75934 225 aaPredicted RBP9.43□□□□□ -0.9
HDLBP-227ENST00000458564 ALDOAP04075 364 aaKnown RBP9.43□□□□□ -0.9
HDLBP-227ENST00000458564 CT45A8P0DMV1 189 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 CT45A9P0DMV2 189 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 PCSK2P16519 638 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 DEKP35659 375 aaKnown RBP9.43□□□□□ -0.9
HDLBP-227ENST00000458564 UGT2B10P36537 528 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 FEN1P39748 380 aaKnown RBP9.43□□□□□ -0.9
HDLBP-227ENST00000458564 MAGEA4P43358 317 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 STARP49675 285 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 B3GALT5-AS1P59052 145 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 TRA2BP62995 288 aaKnown RBP9.43□□□□□ -0.9
HDLBP-227ENST00000458564 DUSP2Q05923 314 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 FAM27E3Q08E93 113 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 IFT88Q13099 833 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 EFR3AQ14156 821 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 TRMT12Q53H54 448 aaKnown RBP9.43□□□□□ -0.9
HDLBP-227ENST00000458564 CT45A2Q5DJT8 189 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 ZNF628Q5EBL2 1059 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 MROH9Q5TGP6 573 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 VWA1Q6PCB0 445 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 ZNF474Q6S9Z5 364 aaPredicted RBP9.43□□□□□ -0.9
HDLBP-227ENST00000458564 YTHDF3Q7Z739 585 aaKnown RBP9.43□□□□□ -0.9
HDLBP-227ENST00000458564 PTGR2Q8N8N7 351 aaPredicted RBP9.43□□□□□ -0.9
HDLBP-227ENST00000458564 SPATA4Q8NEY3 305 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 ADCY4Q8NFM4 1077 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 PPP1R14CQ8TAE6 165 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 RDH11Q8TC12 318 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 FBXO25Q8TCJ0 367 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 IGFBPL1Q8WX77 278 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 CAVIN3Q969G5 261 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 TMBIM1Q969X1 311 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 ATP6V1E2Q96A05 226 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 TM4SF18Q96CE8 201 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 KLHL29Q96CT2 875 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 VSTM2LQ96N03 204 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 CCL19Q99731 98 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 MDFIQ99750 246 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 MED18Q9BUE0 208 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 GSX2Q9BZM3 304 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 ELOVL6Q9H5J4 265 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 BRF2Q9HAW0 419 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 KLHL28Q9NXS3 571 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 ELOVL5Q9NYP7 299 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 CPSF2Q9P2I0 782 aaKnown RBP9.43□□□□□ -0.9
HDLBP-227ENST00000458564 TRPS1Q9UHF7 1281 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 TMCO1Q9UM00 188 aa9.43□□□□□ -0.9
HDLBP-227ENST00000458564 FBN1P35555 2871 aaKnown RBP9.43□□□□□ -0.9
HDLBP-227ENST00000458564 RAI1Q7Z5J4 1906 aaPredicted RBP9.43□□□□□ -0.9
HDLBP-227ENST00000458564 ROS1P08922 2347 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 SLC22A20A6NK97 555 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 SMNDC1O75940 238 aaKnown RBP eCLIP9.42□□□□□ -0.9
HDLBP-227ENST00000458564 CGAP01215 116 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 RPS17P08708 135 aaKnown RBP9.42□□□□□ -0.9
HDLBP-227ENST00000458564 CD8BP10966 210 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 PEPDP12955 493 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 PAX1P15863 534 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 GRK2P25098 689 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 DPP4P27487 766 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 LOXP28300 417 aaPredicted RBP9.42□□□□□ -0.9
HDLBP-227ENST00000458564 ARL1P40616 181 aaPredicted RBP9.42□□□□□ -0.9
HDLBP-227ENST00000458564 MAGEA12P43365 314 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 KIR2DL2P43627 348 aaPredicted RBP9.42□□□□□ -0.9
HDLBP-227ENST00000458564 SERPINB8P50452 374 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 GAS1P54826 345 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 PLTPP55058 493 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 DSCR4P56555 118 aaPredicted RBP9.42□□□□□ -0.9
HDLBP-227ENST00000458564 MRPS35P82673 323 aaKnown RBP9.42□□□□□ -0.9
HDLBP-227ENST00000458564 OCRLQ01968 901 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 FGFBP1Q14512 234 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 GUSBP1Q15486 140 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 LTB4RQ15722 352 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 TTC19Q6DKK2 380 aaPredicted RBP9.42□□□□□ -0.9
HDLBP-227ENST00000458564 ZDHHC24Q6UX98 284 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 BTLAQ7Z6A9 289 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 FADS6Q8N9I5 356 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 PIK3IP1Q96FE7 263 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 NSUN5Q96P11 429 aaKnown RBP9.42□□□□□ -0.9
HDLBP-227ENST00000458564 ADOQ96SZ5 270 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 SLC39A3Q9BRY0 314 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 FAIM2Q9BWQ8 316 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 RNF122Q9H9V4 155 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 HEY2Q9UBP5 337 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 DKKL1Q9UK85 242 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 SLC12A4Q9UP95 1085 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 UTP11Q9Y3A2 253 aaKnown RBP9.42□□□□□ -0.9
HDLBP-227ENST00000458564 ZNF175Q9Y473 711 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 ZNF780BQ9Y6R6 833 aa9.42□□□□□ -0.9
HDLBP-227ENST00000458564 ANK3Q12955 4377 aaKnown RBP9.42□□□□□ -0.9
HDLBP-227ENST00000458564 TRIM64A6NGJ6 449 aa9.41□□□□□ -0.9
HDLBP-227ENST00000458564 TRIM64BA6NI03 449 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms