RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 ADAMTS10Q9H324 1103 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 GXYLT2A0PJZ3 443 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 CHMP24386 653 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 CDKN2CP42773 168 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 SNTB2Q13425 540 aaKnown RBP18.67■□□□□ 0.58
SNX27-204ENST00000458013 ZNF789Q5FWF6 425 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 LIPIQ6XZB0 460 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 MEX3BQ6ZN04 569 aaKnown RBP18.67■□□□□ 0.58
SNX27-204ENST00000458013 ZNF765Q7L2R6 523 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 CSNK1G3Q9Y6M4 447 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 F5H5K5 113 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 LDB3O75112 727 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 GGT1P19440 569 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 KDELR2P33947 212 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 TMEM173Q86WV6 379 aaPredicted RBP18.67■□□□□ 0.58
SNX27-204ENST00000458013 DDIT4LQ96D03 193 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 C12orf42Q96LP6 360 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 PFDN5Q99471 154 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 ZNF559Q9BR84 538 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 LCKP06239 509 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 RAB3BP20337 219 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 RPS15AP62244 130 aaKnown RBP18.66■□□□□ 0.58
SNX27-204ENST00000458013 GBX1Q14549 363 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 ECHDC3Q96DC8 303 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 OR5B2Q96R09 309 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 DCDC2BA2VCK2 349 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 PIP5K1CO60331 668 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 UGT3A2Q3SY77 523 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 C1orf74Q96LT6 269 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 PCDHB16Q9NRJ7 776 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 CICQ96RK0 1608 aaPredicted RBP18.66■□□□□ 0.58
SNX27-204ENST00000458013 MEIS3P2A8K0S8 358 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 GYPBP06028 91 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 RAB4AP20338 218 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 FDXRP22570 491 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 PIWIL3Q7Z3Z3 882 aaKnown RBP18.66■□□□□ 0.58
SNX27-204ENST00000458013 TMEM25Q86YD3 366 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 SLC7A5P1Q8MH63 180 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 NMNAT1Q9HAN9 279 aaPredicted RBP18.66■□□□□ 0.58
SNX27-204ENST00000458013 RHBDD3Q9Y3P4 386 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 ADAM18Q9Y3Q7 739 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 GALNT1Q10472 559 aaPredicted RBP18.66■□□□□ 0.58
SNX27-204ENST00000458013 GRM7Q14831 915 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 ZNF674Q2M3X9 581 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 DEFB133Q30KQ1 61 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 ENDOVQ8N8Q3 282 aaKnown RBP18.66■□□□□ 0.58
SNX27-204ENST00000458013 TUBA1CQ9BQE3 449 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 IGSF5Q9NSI5 407 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 HAO2Q9NYQ3 351 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 LRFN1Q9P244 771 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 FAM230AA0A1W2PPH8 454 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 A0A1W2PQL4 384 aaPredicted RBP18.66■□□□□ 0.58
SNX27-204ENST00000458013 PGCP20142 388 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 HHEXQ03014 270 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 DHCR24Q15392 516 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 RTP2Q5QGT7 225 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 CDC6Q99741 560 aa18.66■□□□□ 0.58
SNX27-204ENST00000458013 OR8U9P0C7N5 309 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 GJA5P36382 358 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 RAB28P51157 221 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 ZNF136P52737 540 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 SLC18B1Q6NT16 456 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 TMEM205Q6UW68 189 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 LIX1LQ8IVB5 337 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 ZNF689Q96CS4 500 aaPredicted RBP18.65■□□□□ 0.58
SNX27-204ENST00000458013 SUCNR1Q9BXA5 334 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 SEZ6LQ9BYH1 1024 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 VSTM2BA6NLU5 285 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 NDUFAF5Q5TEU4 345 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 BLOC1S3Q6QNY0 202 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 IL17RCQ8NAC3 791 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 URM1Q9BTM9 101 aaKnown RBP18.65■□□□□ 0.58
SNX27-204ENST00000458013 FANCFQ9NPI8 374 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 MPPED1O15442 326 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 C9orf135Q5VTT2 229 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 ANKRD13BQ86YJ7 626 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 DEDD2Q8WXF8 326 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 SLC2A13Q96QE2 648 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 NAA11Q9BSU3 229 aaPredicted RBP18.65■□□□□ 0.58
SNX27-204ENST00000458013 LMO7Q8WWI1 1683 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 RAC2P15153 192 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 MC3RP41968 323 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 OR5M10Q6IEU7 315 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 PCTPQ9UKL6 214 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 SYT7O43581 403 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 ERV3-1Q14264 604 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 MARVELD2Q8N4S9 558 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 ASB15Q8WXK1 588 aa18.65■□□□□ 0.58
SNX27-204ENST00000458013 CREBL2O60519 120 aaPredicted RBP18.64■□□□□ 0.58
SNX27-204ENST00000458013 SOCS5O75159 536 aa18.64■□□□□ 0.58
SNX27-204ENST00000458013 WNT7BP56706 349 aa18.64■□□□□ 0.58
SNX27-204ENST00000458013 CLDN2P57739 230 aa18.64■□□□□ 0.58
SNX27-204ENST00000458013 ACTA2P62736 377 aa18.64■□□□□ 0.58
SNX27-204ENST00000458013 ACTG2P63267 376 aa18.64■□□□□ 0.58
SNX27-204ENST00000458013 POU4F3Q15319 338 aa18.64■□□□□ 0.58
SNX27-204ENST00000458013 STK11Q15831 433 aa18.64■□□□□ 0.58
SNX27-204ENST00000458013 MED16Q9Y2X0 877 aa18.64■□□□□ 0.58
SNX27-204ENST00000458013 H0YJX3 145 aa18.64■□□□□ 0.57
SNX27-204ENST00000458013 KIAA0355O15063 1070 aa18.64■□□□□ 0.57
SNX27-204ENST00000458013 GSRP00390 522 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms