RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 DSN1Q9H410 356 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 TRIM45Q9H8W5 580 aaPredicted RBP15.63■□□□□ 0.09
CCDC43-202ENST00000457422 POLMQ9NP87 494 aaPredicted RBP15.63■□□□□ 0.09
CCDC43-202ENST00000457422 POT1Q9NUX5 634 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 SLC13A4Q9UKG4 626 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 MKLN1Q9UL63 735 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 LSM2Q9Y333 95 aaKnown RBP15.63■□□□□ 0.09
CCDC43-202ENST00000457422 ENTPD2Q9Y5L3 495 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 SLC22A7Q9Y694 548 aa15.63■□□□□ 0.09
CCDC43-202ENST00000457422 A0A087WUU8 490 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 CCRL2O00421 344 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 FRS3O43559 492 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 DNAJB6O75190 326 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 ZIC2O95409 532 aaPredicted RBP15.62■□□□□ 0.09
CCDC43-202ENST00000457422 TLX1P31314 330 aaPredicted RBP15.62■□□□□ 0.09
CCDC43-202ENST00000457422 GIPRP48546 466 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 PCYT1AP49585 367 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 TAS2R41P59536 307 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 SIM1P81133 766 aaPredicted RBP15.62■□□□□ 0.09
CCDC43-202ENST00000457422 EFNB1P98172 346 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 MED22Q15528 200 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 ATCAYQ86WG3 371 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 AMER2Q8N7J2 671 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 SMRP1Q8NCR6 262 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 GPBAR1Q8TDU6 330 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 FGF11Q92914 225 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 ZG16BQ96DA0 208 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 ZFYVE21Q9BQ24 234 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 PRR14Q9BWN1 585 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 LYRM4Q9HD34 91 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 TMEM74BQ9NUR3 256 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 RHBDL2Q9NX52 303 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 PTGFRNQ9P2B2 879 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 MMP17Q9ULZ9 603 aa15.62■□□□□ 0.09
CCDC43-202ENST00000457422 GPR55Q9Y2T6 319 aaPredicted RBP15.62■□□□□ 0.09
CCDC43-202ENST00000457422 KPNA4O00629 521 aaPredicted RBP15.61■□□□□ 0.09
CCDC43-202ENST00000457422 CYP7B1O75881 506 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 SEMA4FO95754 770 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 HSMCR30P0CW71 290 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 DBTP11182 482 aaKnown RBP15.61■□□□□ 0.09
CCDC43-202ENST00000457422 IFNGR2P38484 337 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 RABIFP47224 123 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 ATP1A4Q13733 1029 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 GINS1Q14691 196 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 TRAM2Q15035 370 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 FRRS1Q6ZNA5 592 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 ABI3BPQ7Z7G0 1075 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 MRGPREQ86SM8 312 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 OR4N5Q8IXE1 308 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 OR13H1Q8NG92 308 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 HMGB4Q8WW32 186 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 COL26A1Q96A83 441 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 TSSK6Q9BXA6 273 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 TCEAL2Q9H3H9 227 aaPredicted RBP15.61■□□□□ 0.09
CCDC43-202ENST00000457422 KLHL28Q9NXS3 571 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 LOC105369274A0A096LPK9 316 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 LOC102723532A0A0G2JNH3 316 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 C2orf74A8MZ97 194 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 DSCR3O14972 297 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 ZSCAN9O15535 394 aaPredicted RBP15.61■□□□□ 0.09
CCDC43-202ENST00000457422 PRKYO43930 277 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 TNFP01375 233 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 ALOX12P18054 663 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 SMSP52788 366 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 PDX1P52945 283 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 UBE2IP63279 158 aaKnown RBP15.61■□□□□ 0.09
CCDC43-202ENST00000457422 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.61■□□□□ 0.09
CCDC43-202ENST00000457422 ST3GAL3Q11203 375 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 DOC2BQ14184 412 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 OXA1LQ15070 435 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 TSTQ16762 297 aaKnown RBP15.61■□□□□ 0.09
CCDC43-202ENST00000457422 ZNF554Q86TJ5 538 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 OR4N4Q8N0Y3 316 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 SLC22A18ASQ8N1D0 253 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 SLC16A11Q8NCK7 471 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 GNPDA2Q8TDQ7 276 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 OPALINQ96PE5 141 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 MROQ9BYG7 248 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 EVA1BQ9NVM1 165 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 TVP23BQ9NYZ1 205 aa15.61■□□□□ 0.09
CCDC43-202ENST00000457422 USP36Q9P275 1121 aaKnown RBP15.61■□□□□ 0.09
CCDC43-202ENST00000457422 MRPS2Q9Y399 296 aaKnown RBP15.61■□□□□ 0.09
CCDC43-202ENST00000457422 BRWD1Q9NSI6 2320 aa15.6■□□□□ 0.09
CCDC43-202ENST00000457422 LOC100506127A0A0U1RQW1 187 aa15.6■□□□□ 0.09
CCDC43-202ENST00000457422 ZNF860A6NHJ4 632 aa15.6■□□□□ 0.09
CCDC43-202ENST00000457422 FCMRO60667 390 aa15.6■□□□□ 0.09
CCDC43-202ENST00000457422 SCG5P05408 212 aa15.6■□□□□ 0.09
CCDC43-202ENST00000457422 CPMP14384 443 aa15.6■□□□□ 0.09
CCDC43-202ENST00000457422 PVRP15151 417 aa15.6■□□□□ 0.09
CCDC43-202ENST00000457422 ENDOUP21128 410 aaKnown RBP15.6■□□□□ 0.09
CCDC43-202ENST00000457422 IFNA8P32881 189 aa15.6■□□□□ 0.09
CCDC43-202ENST00000457422 SOX18P35713 384 aa15.6■□□□□ 0.09
CCDC43-202ENST00000457422 RANBP1P43487 201 aa15.6■□□□□ 0.09
CCDC43-202ENST00000457422 LSSP48449 732 aa15.6■□□□□ 0.09
CCDC43-202ENST00000457422 SSX1Q16384 188 aa15.6■□□□□ 0.09
CCDC43-202ENST00000457422 ARHGAP11BQ3KRB8 267 aa15.6■□□□□ 0.09
CCDC43-202ENST00000457422 SOWAHCQ53LP3 525 aaPredicted RBP15.6■□□□□ 0.09
CCDC43-202ENST00000457422 MANEAQ5SRI9 462 aa15.6■□□□□ 0.09
CCDC43-202ENST00000457422 RNF44Q7L0R7 432 aa15.6■□□□□ 0.09
CCDC43-202ENST00000457422 BCDIN3DQ7Z5W3 292 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms