RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 VAMP3Q15836 100 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 ASTE1Q2TB18 679 aaPredicted RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 C5orf47Q569G3 176 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 PRAMEF19Q5SWL8 479 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 PXDC1Q5TGL8 231 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 ZNF691Q5VV52 312 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 C11orf63Q6NUN7 778 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 DENND1BQ6P3S1 775 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 TMEM81Q6P7N7 255 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 ARCQ7LC44 396 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 RRM2BQ7LG56 351 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 MYPOPQ86VE0 399 aaPredicted RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 ZNF280BQ86YH2 543 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 DCUN1D3Q8IWE4 304 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 ADHFE1Q8IWW8 467 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 ZFP82Q8N141 532 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 NECAP1Q8NC96 275 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 PROKR2Q8NFJ6 384 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 OR4C5Q8NGB2 326 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 OR5B17Q8NGF7 314 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 OR52N2Q8NGI0 321 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 OR6X1Q8NH79 312 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 OR2V1Q8NHB1 315 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.07□□□□□ -1.6
VPS41-209ENST00000457055 OCC1Q8TAD7 63 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 CASKIN2Q8WXE0 1202 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 PIGBQ92521 554 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 SNRNP40Q96DI7 357 aaKnown RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 ASB9Q96DX5 294 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 MARS2Q96GW9 593 aaKnown RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 C4orf36Q96KX1 117 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 SEPT5Q99719 369 aaPredicted RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 NAPGQ99747 312 aaPredicted RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 P2RY13Q9BPV8 354 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 UTP23Q9BRU9 249 aaKnown RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 KATNB1Q9BVA0 655 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 CPEB1Q9BZB8 566 aaKnown RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 SRRQ9GZT4 340 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 CCDC90BQ9GZT6 254 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 ENKD1Q9H0I2 346 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 SLCO5A1Q9H2Y9 848 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 TRABDQ9H4I3 376 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 WDR55Q9H6Y2 383 aaPredicted RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 ANKRA2Q9H9E1 313 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 RNF14Q9UBS8 474 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 PISDQ9UG56 409 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 SLC22A13Q9Y226 551 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 L3MBTL1Q9Y468 752 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 TBL2Q9Y4P3 447 aaKnown RBP5.07□□□□□ -1.6
VPS41-209ENST00000457055 RIPK3Q9Y572 518 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 SLCO1B1Q9Y6L6 691 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 URGCP-MRPS24S4R325 110 aa5.07□□□□□ -1.6
VPS41-209ENST00000457055 FAM208AQ9UK61 1670 aaKnown RBP5.06□□□□□ -1.6
VPS41-209ENST00000457055 CENPVL1A0A0U1RR11 272 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 FAM172BPA6NC97 362 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 MBD3L4A6NDZ8 208 aaPredicted RBP5.06□□□□□ -1.6
VPS41-209ENST00000457055 MBD3L3A6NE82 208 aaPredicted RBP5.06□□□□□ -1.6
VPS41-209ENST00000457055 C5orf52A6NGY3 159 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 METTL15A6NJ78 407 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 ZAR1LA6NP61 321 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 TEX46H3BTG2 121 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 FOXE1O00358 373 aaPredicted RBP5.06□□□□□ -1.6
VPS41-209ENST00000457055 CHP2O43745 196 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 SCO2O43819 266 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 HS6ST1O60243 411 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 SELENOFO60613 162 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 SLC43A1O75387 559 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 WDR47O94967 919 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 FTH1P02794 183 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 MELTFP08582 738 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 OR52Z1P0C646 297 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 SMIM6P0DI80 62 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 PRF1P14222 555 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 RAB3AP20336 220 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 ME2P23368 584 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 ACKR3P25106 362 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 LMO1P25800 156 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 PRDX6P30041 224 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 PTPN7P35236 360 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 RCVRNP35243 200 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 PCK1P35558 622 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 CPOXP36551 454 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 MAP3K8P41279 467 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 GPR12P47775 334 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 STK19P49842 368 aaPredicted RBP5.06□□□□□ -1.6
VPS41-209ENST00000457055 MLF1P58340 268 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 ESRRGP62508 458 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 MRPS21P82921 87 aaKnown RBP5.06□□□□□ -1.6
VPS41-209ENST00000457055 MYL7Q01449 175 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 DEFA6Q01524 100 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 RBPJQ06330 500 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 FGL1Q08830 312 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 DMWDQ09019 674 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 MGAT3Q09327 533 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 RIPPLY1Q0D2K3 151 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 BAMBIQ13145 260 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 SLC9A3R2Q15599 337 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 EXOC3L4Q17RC7 722 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 ANKRD55Q3KP44 614 aa5.06□□□□□ -1.6
VPS41-209ENST00000457055 ZIK1Q3SY52 487 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms