RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 NTRK2Q16620 822 aa9.26□□□□□ -0.93
ATG4A-206ENST00000457035 MAPKAPK3Q16644 382 aa9.26□□□□□ -0.93
ATG4A-206ENST00000457035 EXOSC6Q5RKV6 272 aaKnown RBP9.26□□□□□ -0.93
ATG4A-206ENST00000457035 ANXA8L1Q5VT79 327 aa9.26□□□□□ -0.93
ATG4A-206ENST00000457035 NPSR1Q6W5P4 371 aa9.26□□□□□ -0.93
ATG4A-206ENST00000457035 ANKRD46Q86W74 232 aa9.26□□□□□ -0.93
ATG4A-206ENST00000457035 TAGAPQ8N103 731 aa9.26□□□□□ -0.93
ATG4A-206ENST00000457035 CYP4Z2PQ8N1L4 340 aa9.26□□□□□ -0.93
ATG4A-206ENST00000457035 MIER2Q8N344 545 aa9.26□□□□□ -0.93
ATG4A-206ENST00000457035 CISD2Q8N5K1 135 aaKnown RBP9.26□□□□□ -0.93
ATG4A-206ENST00000457035 VPS37AQ8NEZ2 397 aa9.26□□□□□ -0.93
ATG4A-206ENST00000457035 OR4N2Q8NGD1 307 aa9.26□□□□□ -0.93
ATG4A-206ENST00000457035 GOT1L1Q8NHS2 421 aaPredicted RBP9.26□□□□□ -0.93
ATG4A-206ENST00000457035 SPACA9Q96E40 222 aaPredicted RBP9.26□□□□□ -0.93
ATG4A-206ENST00000457035 TAAR6Q96RI8 345 aa9.26□□□□□ -0.93
ATG4A-206ENST00000457035 BARD1Q99728 777 aaKnown RBP9.26□□□□□ -0.93
ATG4A-206ENST00000457035 LMF2Q9BU23 707 aaKnown RBP9.26□□□□□ -0.93
ATG4A-206ENST00000457035 TMEM120AQ9BXJ8 343 aa9.26□□□□□ -0.93
ATG4A-206ENST00000457035 ZNF385DQ9H6B1 395 aa9.26□□□□□ -0.93
ATG4A-206ENST00000457035 C3orf14Q9HBI5 128 aa9.26□□□□□ -0.93
ATG4A-206ENST00000457035 SLC52A3Q9NQ40 469 aa9.26□□□□□ -0.93
ATG4A-206ENST00000457035 FAM120CQ9NX05 1096 aaKnown RBP9.26□□□□□ -0.93
ATG4A-206ENST00000457035 BTNL2Q9UIR0 455 aa9.26□□□□□ -0.93
ATG4A-206ENST00000457035 COPG1Q9Y678 874 aaKnown RBP9.26□□□□□ -0.93
ATG4A-206ENST00000457035 RELNP78509 3460 aa9.26□□□□□ -0.93
ATG4A-206ENST00000457035 FAM234BA2RU67 622 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 FRG2CA6NGY1 282 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 TTC36A6NLP5 189 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 TTLL8A6PVC2 850 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 CFLARO15519 480 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 NME2P1O60361 137 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 CPSF4O95639 269 aaKnown RBP9.25□□□□□ -0.93
ATG4A-206ENST00000457035 TROVE2P10155 538 aaKnown RBP eCLIP9.25□□□□□ -0.93
ATG4A-206ENST00000457035 NME2P22392 152 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 ATP4BP51164 291 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 POLR2JP52435 117 aaKnown RBP9.25□□□□□ -0.93
ATG4A-206ENST00000457035 ARFIP2P53365 341 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 SEC24CP53992 1094 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 PRKAG1P54619 331 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 NRG3P56975 720 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 IRX1P78414 480 aaPredicted RBP9.25□□□□□ -0.93
ATG4A-206ENST00000457035 SF3A3Q12874 501 aaKnown RBP eCLIP9.25□□□□□ -0.93
ATG4A-206ENST00000457035 NNATQ16517 81 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 METTL21CQ5VZV1 264 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 SLC22A10Q63ZE4 541 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 ZCCHC12Q6PEW1 402 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 RTL4Q6ZR62 310 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 GALNTL5Q7Z4T8 443 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 WDR53Q7Z5U6 358 aaPredicted RBP9.25□□□□□ -0.93
ATG4A-206ENST00000457035 SLC44A2Q8IWA5 706 aaPredicted RBP9.25□□□□□ -0.93
ATG4A-206ENST00000457035 SULF2Q8IWU5 870 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 DND1Q8IYX4 353 aaKnown RBP9.25□□□□□ -0.93
ATG4A-206ENST00000457035 PRR22Q8IZ63 422 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 GOLM1Q8NBJ4 401 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 TMEM178AQ8NBL3 297 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 PSD4Q8NDX1 1056 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 PAQR8Q8TEZ7 354 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 TMBIM1Q969X1 311 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 TMEM125Q96AQ2 219 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 NTNG2Q96CW9 530 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 SNRNP40Q96DI7 357 aaKnown RBP9.25□□□□□ -0.93
ATG4A-206ENST00000457035 OMA1Q96E52 524 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 CHMP6Q96FZ7 201 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 C16orf58Q96GQ5 468 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 C5orf34Q96MH7 638 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 RILPQ96NA2 401 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 CCDC115Q96NT0 180 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 OR52E6Q96RD3 313 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 ZBTB18Q99592 522 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 EPN3Q9H201 632 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 PROK2Q9HC23 129 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 NEUROD4Q9HD90 331 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 TIMMDC1Q9NPL8 285 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 SERHLQ9NQF3 203 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 KLHL1Q9NR64 748 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 DEPPQ9NTK1 212 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 ZCCHC3Q9NUD5 404 aaKnown RBP9.25□□□□□ -0.93
ATG4A-206ENST00000457035 GPATCH2Q9NW75 528 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 TMEM45AQ9NWC5 275 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 KLHL14Q9P2G3 628 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 PCDHGB4Q9UN71 923 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 NTNG1Q9Y2I2 539 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 SNX8Q9Y5X2 465 aa9.25□□□□□ -0.93
ATG4A-206ENST00000457035 CHCHD2Q9Y6H1 151 aaPredicted RBP9.25□□□□□ -0.93
ATG4A-206ENST00000457035 ASPDHA6ND91 283 aa9.24□□□□□ -0.93
ATG4A-206ENST00000457035 CAPN14A8MX76 684 aa9.24□□□□□ -0.93
ATG4A-206ENST00000457035 PEX1O43933 1283 aa9.24□□□□□ -0.93
ATG4A-206ENST00000457035 TSPAN2O60636 221 aa9.24□□□□□ -0.93
ATG4A-206ENST00000457035 PPM1BO75688 479 aa9.24□□□□□ -0.93
ATG4A-206ENST00000457035 NKX2-2O95096 273 aa9.24□□□□□ -0.93
ATG4A-206ENST00000457035 HMGN2P05204 90 aaKnown RBP9.24□□□□□ -0.93
ATG4A-206ENST00000457035 CCL3P10147 92 aa9.24□□□□□ -0.93
ATG4A-206ENST00000457035 NCF2P19878 526 aaPredicted RBP9.24□□□□□ -0.93
ATG4A-206ENST00000457035 CNR1P21554 472 aa9.24□□□□□ -0.93
ATG4A-206ENST00000457035 UQCRC2P22695 453 aa9.24□□□□□ -0.93
ATG4A-206ENST00000457035 LSP1P33241 339 aa9.24□□□□□ -0.93
ATG4A-206ENST00000457035 GABRA3P34903 492 aa9.24□□□□□ -0.93
ATG4A-206ENST00000457035 MAN2A2P49641 1150 aa9.24□□□□□ -0.93
ATG4A-206ENST00000457035 FBXW4P57775 412 aa9.24□□□□□ -0.93
ATG4A-206ENST00000457035 PRR5P85299 388 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms