RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 CLEC12AQ5QGZ9 265 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 DCST1Q5T197 706 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 CASP12Q6UXS9 341 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 TMEM92Q6UXU6 159 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 RAB43Q86YS6 212 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 KLHL6Q8WZ60 621 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 TSACCQ96A04 125 aaPredicted RBP11.68□□□□□ -0.54
LINC00959-201ENST00000456581 LRR1Q96L50 414 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 CAMK1GQ96NX5 476 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 APOOQ9BUR5 198 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 SNX7Q9UNH6 387 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 TMPRSS11DO60235 418 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 CH25HO95992 272 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 TP53P04637 393 aaPredicted RBP11.68□□□□□ -0.54
LINC00959-201ENST00000456581 PTX3P26022 381 aaPredicted RBP11.68□□□□□ -0.54
LINC00959-201ENST00000456581 PRKAG1P54619 331 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 ALDH6A1Q02252 535 aaKnown RBP11.68□□□□□ -0.54
LINC00959-201ENST00000456581 KRT33BQ14525 404 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 SPDYE7PQ495Y7 208 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 MFSD4BQ5TF39 518 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 KIAA1324Q6UXG2 1013 aaKnown RBP11.68□□□□□ -0.54
LINC00959-201ENST00000456581 FBXL6Q8N531 539 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 ATP6V1C2Q8NEY4 427 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 OR2A1Q8NGT9 310 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 PCNPQ8WW12 178 aaKnown RBP11.68□□□□□ -0.54
LINC00959-201ENST00000456581 XAGE5Q8WWM1 108 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 SMPDL3AQ92484 453 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 SIPA1Q96FS4 1042 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 NELL2Q99435 816 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 KLHL31Q9H511 634 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 TEX10Q9NXF1 929 aaPredicted RBP11.68□□□□□ -0.54
LINC00959-201ENST00000456581 CNOT2Q9NZN8 540 aaKnown RBP11.68□□□□□ -0.54
LINC00959-201ENST00000456581 COMMD3Q9UBI1 195 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 PLEKHB1Q9UF11 243 aaPredicted RBP11.68□□□□□ -0.54
LINC00959-201ENST00000456581 TMCC3Q9ULS5 477 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 CMAHPQ9Y471 501 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 PIAS3Q9Y6X2 628 aa11.68□□□□□ -0.54
LINC00959-201ENST00000456581 SHISA3A0PJX4 238 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 B4DXG7 233 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 C4orf51C9J302 202 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 ZNF670-ZNF695F2Z2N8 137 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 HMGN4O00479 90 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 MYL12BO14950 172 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 TPD52L2O43399 206 aaKnown RBP11.67□□□□□ -0.54
LINC00959-201ENST00000456581 TMCC2O75069 709 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 ASGR2P07307 311 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 GPC1P35052 558 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 MAN2A2P49641 1150 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 SNRPNP63162 240 aaKnown RBP11.67□□□□□ -0.54
LINC00959-201ENST00000456581 PYDC2Q56P42 97 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 KHDRBS2Q5VWX1 349 aaKnown RBP11.67□□□□□ -0.54
LINC00959-201ENST00000456581 PODNL1Q6PEZ8 512 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 IQCHQ86VS3 1027 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 OR52E1Q8NGJ3 308 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 OR52I1Q8NGK6 324 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 FCRL4Q96PJ5 515 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 MS4A8Q9BY19 250 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 NLNQ9BYT8 704 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 TRPV5Q9NQA5 729 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 CRNNQ9UBG3 495 aaPredicted RBP11.67□□□□□ -0.54
LINC00959-201ENST00000456581 KCND3Q9UK17 655 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 STUB1Q9UNE7 303 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 MAU2Q9Y6X3 613 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 ALPK2Q86TB3 2170 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 SCO2O43819 266 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 SLC28A2O43868 658 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 H1F0P07305 194 aaKnown RBP11.67□□□□□ -0.54
LINC00959-201ENST00000456581 BSGP35613 385 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 TNFRSF4P43489 277 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 CCR8P51685 355 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 CSNK1G2P78368 415 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 RBBP4Q09028 425 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 HEPACAMQ14CZ8 416 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 TIMM50Q3ZCQ8 353 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 C6orf120Q7Z4R8 191 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 UBE3DQ7Z6J8 389 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 SFTPA2Q8IWL1 248 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 NANOGP1Q8N7R0 232 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 OR52P1PQ8NH57 321 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 C9orf43Q8TAL5 461 aaPredicted RBP11.67□□□□□ -0.54
LINC00959-201ENST00000456581 SLC7A6Q92536 515 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 UBE2E3Q969T4 207 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 ARSGQ96EG1 525 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 C1GALT1C1Q96EU7 318 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 MRGPRX1Q96LB2 322 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 SMAD5Q99717 465 aaKnown RBP11.67□□□□□ -0.54
LINC00959-201ENST00000456581 GABRG3Q99928 467 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 C17orf62Q9BQA9 187 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 AIF1LQ9BQI0 150 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 CCDC32Q9BV29 185 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 MOV10Q9HCE1 1003 aaKnown RBP11.67□□□□□ -0.54
LINC00959-201ENST00000456581 MYNNQ9NPC7 610 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 NDUFB11Q9NX14 153 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 TBC1D29Q9UFV1 150 aa11.67□□□□□ -0.54
LINC00959-201ENST00000456581 NDRG2Q9UN36 371 aaKnown RBP11.67□□□□□ -0.54
LINC00959-201ENST00000456581 MN1Q10571 1320 aaPredicted RBP11.67□□□□□ -0.54
LINC00959-201ENST00000456581 FRYLO94915 3013 aa11.66□□□□□ -0.54
LINC00959-201ENST00000456581 TMEM265A0A087WTH1 108 aa11.66□□□□□ -0.54
LINC00959-201ENST00000456581 HYKKA2RU49 373 aa11.66□□□□□ -0.54
LINC00959-201ENST00000456581 SH3D21A4FU49 640 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms