RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 MRPL21Q7Z2W9 205 aaKnown RBP8.1□□□□□ -1.11
PTPN3-204ENST00000446349 COMMD6Q7Z4G1 85 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 DND1Q8IYX4 353 aaKnown RBP8.1□□□□□ -1.11
PTPN3-204ENST00000446349 CANT1Q8WVQ1 401 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 CHFRQ96EP1 664 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 UBQLN4Q9NRR5 601 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 C1GALT1Q9NS00 363 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 MRPS2Q9Y399 296 aaKnown RBP8.1□□□□□ -1.11
PTPN3-204ENST00000446349 PCDHGA6Q9Y5G7 932 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 TLCD2A6NGC4 264 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 XRCC1P18887 633 aaPredicted RBP8.1□□□□□ -1.11
PTPN3-204ENST00000446349 GJA5P36382 358 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 POLR2HP52434 150 aaKnown RBP8.1□□□□□ -1.11
PTPN3-204ENST00000446349 CRYZQ08257 329 aaKnown RBP8.1□□□□□ -1.11
PTPN3-204ENST00000446349 GPR176Q14439 515 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 RSU1Q15404 277 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 FAM78AQ5JUQ0 283 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 PGBD2Q6P3X8 592 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 ARMC5Q96C12 935 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 RHBDF1Q96CC6 855 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 FOXRED1Q96CU9 486 aaPredicted RBP8.1□□□□□ -1.11
PTPN3-204ENST00000446349 SLC19A3Q9BZV2 496 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 SEMA6CQ9H3T2 930 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 KCNN3Q9UGI6 736 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 ECM29Q5VYK3 1845 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 KLRC4-KLRK1H3BQV0 150 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 NOS1APO75052 506 aaPredicted RBP8.1□□□□□ -1.11
PTPN3-204ENST00000446349 PCGF2P35227 344 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 GCGRP47871 477 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 KANK2Q63ZY3 851 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 WDTC1Q8N5D0 677 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 CPEB3Q8NE35 698 aaKnown RBP8.1□□□□□ -1.11
PTPN3-204ENST00000446349 ANKK1Q8NFD2 765 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 OR5K2Q8NHB8 316 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 FAM46BQ96A09 425 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 KLHL15Q96M94 604 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 BCL7BQ9BQE9 202 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 DMRT3Q9NQL9 472 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 ACSS1Q9NUB1 689 aaPredicted RBP8.1□□□□□ -1.11
PTPN3-204ENST00000446349 CDC123O75794 336 aaPredicted RBP8.1□□□□□ -1.11
PTPN3-204ENST00000446349 KIAA1024LP59773 190 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 ID2Q02363 134 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 TAP2Q03519 686 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 DBPQ10586 325 aaPredicted RBP8.1□□□□□ -1.11
PTPN3-204ENST00000446349 DUSP6Q16828 381 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 BLOC1S3Q6QNY0 202 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 TMEM68Q96MH6 324 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 FZD3Q9NPG1 666 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 NUMBLQ9Y6R0 609 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 FAM149AA5PLN7 773 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 C2orf72A6NCS6 295 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 RBBP9O75884 186 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 IFNA7P01567 189 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 INHBCP55103 352 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 MXD1Q05195 221 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 UNC50Q53HI1 259 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 TCEANCQ8N8B7 351 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 OR11L1Q8NGX0 322 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 ULBP3Q9BZM4 244 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 ZBTB20Q9HC78 741 aaPredicted RBP8.1□□□□□ -1.11
PTPN3-204ENST00000446349 INPP5EQ9NRR6 644 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 CMAHPQ9Y471 501 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 DLGAP1O14490 977 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 OPN1SWP03999 348 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 RETP07949 1114 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 SRFP11831 508 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 TCN2P20062 427 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 PEX2P28328 305 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 CCR5P51681 352 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 WDR4P57081 412 aaKnown RBP8.1□□□□□ -1.11
PTPN3-204ENST00000446349 ZNF45Q02386 682 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 EML3Q32P44 896 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 LNX2Q8N448 690 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 STOML3Q8TAV4 291 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 NAT14Q8WUY8 206 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 DCSTAMPQ9H295 470 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 IL26Q9NPH9 171 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 ATP13A2Q9NQ11 1180 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 COPZ2Q9P299 210 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 PCDHGA10Q9Y5H3 936 aa8.1□□□□□ -1.11
PTPN3-204ENST00000446349 SULT2B1O00204 365 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 WNT11O96014 354 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 PRLP01236 227 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 MSX1P28360 303 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 ZNF773Q6PK81 442 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 CHST14Q8NCH0 376 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 RBCK1Q9BYM8 510 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 PISDQ9UG56 409 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 PADI1Q9ULC6 663 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 LINC01553A4QN01 128 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 MSL3P1P0C860 447 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 ZNF888P0CJ79 500 aaPredicted RBP8.09□□□□□ -1.11
PTPN3-204ENST00000446349 SSR4P51571 173 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 ERVK-16P61578 105 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 WBP2NLQ6ICG8 309 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 B3GNT9Q6UX72 402 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 TMEM173Q86WV6 379 aaPredicted RBP8.09□□□□□ -1.11
PTPN3-204ENST00000446349 SPIN2AQ99865 258 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 SPIN2BQ9BPZ2 258 aa8.09□□□□□ -1.11
PTPN3-204ENST00000446349 TMED9Q9BVK6 235 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms