RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 MIER2Q8N344 545 aa15.77■□□□□ 0.12
AP1S3-207ENST00000444408 SLC16A11Q8NCK7 471 aa15.77■□□□□ 0.12
AP1S3-207ENST00000444408 OR4A15Q8NGL6 344 aa15.77■□□□□ 0.12
AP1S3-207ENST00000444408 PIK3R3Q92569 461 aa15.77■□□□□ 0.12
AP1S3-207ENST00000444408 HSPBAP1Q96EW2 488 aa15.77■□□□□ 0.12
AP1S3-207ENST00000444408 RILPQ96NA2 401 aa15.77■□□□□ 0.12
AP1S3-207ENST00000444408 FRMD6Q96NE9 622 aa15.77■□□□□ 0.12
AP1S3-207ENST00000444408 LMF2Q9BU23 707 aaKnown RBP15.77■□□□□ 0.12
AP1S3-207ENST00000444408 TSPAN10Q9H1Z9 355 aaPredicted RBP15.77■□□□□ 0.12
AP1S3-207ENST00000444408 C3orf14Q9HBI5 128 aa15.77■□□□□ 0.12
AP1S3-207ENST00000444408 ZIM2Q9NZV7 527 aa15.77■□□□□ 0.12
AP1S3-207ENST00000444408 CNOT11Q9UKZ1 510 aaKnown RBP15.77■□□□□ 0.12
AP1S3-207ENST00000444408 PCDHGB6Q9Y5F9 930 aa15.77■□□□□ 0.12
AP1S3-207ENST00000444408 ACOX3O15254 700 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 UGT2B11O75310 529 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 PPM1BO75688 479 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 HMGN2P05204 90 aaKnown RBP15.76■□□□□ 0.11
AP1S3-207ENST00000444408 PGRP06401 933 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 IFI6P09912 130 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 GABRA3P34903 492 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 MAP3K8P41279 467 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 CASP9P55211 416 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 NRG3P56975 720 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 DCAF7P61962 342 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 RPS26P62854 115 aaKnown RBP15.76■□□□□ 0.11
AP1S3-207ENST00000444408 TP53BP2Q13625 1128 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 LASP1Q14847 261 aaKnown RBP15.76■□□□□ 0.11
AP1S3-207ENST00000444408 DUSP5Q16690 384 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 GALNT10Q86SR1 603 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 FUNDC1Q8IVP5 155 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 SLC34A3Q8N130 599 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 NATD1Q8N6N6 113 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 GOLM1Q8NBJ4 401 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 PAQR8Q8TEZ7 354 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 SLC9A6Q92581 669 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 HGDQ93099 445 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 VPS33AQ96AX1 596 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 MIB2Q96AX9 1013 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 EFHD2Q96C19 240 aaPredicted RBP15.76■□□□□ 0.11
AP1S3-207ENST00000444408 SGCZQ96LD1 299 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 MS4A4EQ96PG1 132 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 OR52E6Q96RD3 313 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 NODALQ96S42 347 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 ZBTB18Q99592 522 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 BARD1Q99728 777 aaKnown RBP15.76■□□□□ 0.11
AP1S3-207ENST00000444408 SERHL2Q9H4I8 314 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 SLC6A13Q9NSD5 602 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 KLF13Q9Y2Y9 288 aaPredicted RBP15.76■□□□□ 0.11
AP1S3-207ENST00000444408 KCNE3Q9Y6H6 103 aa15.76■□□□□ 0.11
AP1S3-207ENST00000444408 SHANK1Q9Y566 2161 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 ASPDHA6ND91 283 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 TSPAN2O60636 221 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 REM1O75628 298 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 IGKV1D-16P01601 117 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 GSNP06396 782 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 TROVE2P10155 538 aaKnown RBP eCLIP15.75■□□□□ 0.11
AP1S3-207ENST00000444408 NCF2P19878 526 aaPredicted RBP15.75■□□□□ 0.11
AP1S3-207ENST00000444408 CNR1P21554 472 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 POLR2JP52435 117 aaKnown RBP15.75■□□□□ 0.11
AP1S3-207ENST00000444408 SEC24CP53992 1094 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 FOXK1P85037 733 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 DPY19L1Q2PZI1 675 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 TIGD2Q4W5G0 525 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 EXOSC6Q5RKV6 272 aaKnown RBP15.75■□□□□ 0.11
AP1S3-207ENST00000444408 ANXA8L1Q5VT79 327 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 SLC22A10Q63ZE4 541 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 ZNF324BQ6AW86 544 aaPredicted RBP15.75■□□□□ 0.11
AP1S3-207ENST00000444408 FAM180AQ6UWF9 173 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 GLB1L3Q8NCI6 653 aaPredicted RBP15.75■□□□□ 0.11
AP1S3-207ENST00000444408 OR2M7Q8NG81 312 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 SPPL2AQ8TCT8 520 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 FAR1Q8WVX9 515 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 HOXB13Q92826 284 aaPredicted RBP15.75■□□□□ 0.11
AP1S3-207ENST00000444408 CCDC115Q96NT0 180 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 ADOQ96SZ5 270 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 ZNF385DQ9H6B1 395 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 NEUROD4Q9HD90 331 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 SERHLQ9NQF3 203 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 SACM1LQ9NTJ5 587 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 GPATCH2Q9NW75 528 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 FAM120CQ9NX05 1096 aaKnown RBP15.75■□□□□ 0.11
AP1S3-207ENST00000444408 TUBA8Q9NY65 449 aaPredicted RBP15.75■□□□□ 0.11
AP1S3-207ENST00000444408 FLRT3Q9NZU0 649 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 OR10H1Q9Y4A9 318 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 HRH3Q9Y5N1 445 aa15.75■□□□□ 0.11
AP1S3-207ENST00000444408 NUP214P35658 2090 aaPredicted RBP15.74■□□□□ 0.11
AP1S3-207ENST00000444408 RNF103-CHMP3A0A140T963 221 aa15.74■□□□□ 0.11
AP1S3-207ENST00000444408 FAM234BA2RU67 622 aa15.74■□□□□ 0.11
AP1S3-207ENST00000444408 C2orf72A6NCS6 295 aa15.74■□□□□ 0.11
AP1S3-207ENST00000444408 ZNHIT1O43257 154 aa15.74■□□□□ 0.11
AP1S3-207ENST00000444408 NKX2-2O95096 273 aa15.74■□□□□ 0.11
AP1S3-207ENST00000444408 P04436 131 aa15.74■□□□□ 0.11
AP1S3-207ENST00000444408 RFX3P48380 749 aa15.74■□□□□ 0.11
AP1S3-207ENST00000444408 MRPL19P49406 292 aaKnown RBP15.74■□□□□ 0.11
AP1S3-207ENST00000444408 STX1BP61266 288 aa15.74■□□□□ 0.11
AP1S3-207ENST00000444408 PRR5P85299 388 aa15.74■□□□□ 0.11
AP1S3-207ENST00000444408 FOXO1Q12778 655 aa15.74■□□□□ 0.11
AP1S3-207ENST00000444408 DNAJC14Q6Y2X3 702 aaPredicted RBP15.74■□□□□ 0.11
AP1S3-207ENST00000444408 FBXW8Q8N3Y1 598 aa15.74■□□□□ 0.11
AP1S3-207ENST00000444408 BCORP1Q8N888 145 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms