RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 PSD4Q8NDX1 1056 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 GOT1L1Q8NHS2 421 aaPredicted RBP14.75□□□□□ -0.05
USP39-205ENST00000442708 SFXN5Q8TD22 340 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 TMBIM1Q969X1 311 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 SNRNP40Q96DI7 357 aaKnown RBP14.75□□□□□ -0.05
USP39-205ENST00000442708 MS4A4EQ96PG1 132 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 SERHL2Q9H4I8 314 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 PROK2Q9HC23 129 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 NEUROD4Q9HD90 331 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 CCDC167Q9P0B6 97 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 PCDHGB6Q9Y5F9 930 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 SHANK1Q9Y566 2161 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 PINLYPA6NC86 204 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 TSPAN2O60636 221 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 PPM1BO75688 479 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 WISP2O76076 250 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 IGKV1D-16P01601 117 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 GSNP06396 782 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 CAPN3P20807 821 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 GABRA3P34903 492 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 MAN2A2P49641 1150 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 NRG3P56975 720 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 GPR85P60893 370 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 RPS26P62854 115 aaKnown RBP14.74□□□□□ -0.05
USP39-205ENST00000442708 PRR5P85299 388 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 TP53BP2Q13625 1128 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 RCAN2Q14206 197 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 LASP1Q14847 261 aaKnown RBP14.74□□□□□ -0.05
USP39-205ENST00000442708 INPP5JQ15735 1006 aaPredicted RBP14.74□□□□□ -0.05
USP39-205ENST00000442708 DUSP5Q16690 384 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 SPDYE7PQ495Y7 208 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 METTL21CQ5VZV1 264 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 BICRALQ6AI39 1079 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 SLC2A7Q6PXP3 512 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 SULF2Q8IWU5 870 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 CPSF7Q8N684 471 aaKnown RBP14.74□□□□□ -0.05
USP39-205ENST00000442708 CDRT4Q8N9R6 151 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 GOLM1Q8NBJ4 401 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 FAM13CQ8NE31 585 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 VPS37AQ8NEZ2 397 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 OR56A1Q8NGH5 318 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 PAQR8Q8TEZ7 354 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 PIK3R3Q92569 461 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 HGDQ93099 445 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 C5orf34Q96MH7 638 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 ELAC2Q9BQ52 826 aaKnown RBP14.74□□□□□ -0.05
USP39-205ENST00000442708 CNOT11Q9UKZ1 510 aaKnown RBP14.74□□□□□ -0.05
USP39-205ENST00000442708 KCNE3Q9Y6H6 103 aa14.74□□□□□ -0.05
USP39-205ENST00000442708 NINQ8N4C6 2090 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 NCKAP5O14513 1909 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 RNF103-CHMP3A0A140T963 221 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 GMNCA6NCL1 334 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 TTLL8A6PVC2 850 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 NR5A2O00482 541 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 UGT2B11O75310 529 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 NKX2-2O95096 273 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 PTPN6P29350 595 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 PIGAP37287 484 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 CASP9P55211 416 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 PLCXD2Q0VAA5 305 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 GTDC1Q4AE62 458 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 VPS26BQ4G0F5 336 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 GK5Q6ZS86 529 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 PRICKLE2Q7Z3G6 844 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 C6orf120Q7Z4R8 191 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.73□□□□□ -0.05
USP39-205ENST00000442708 SLC9A6Q92581 669 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 GTF2H4Q92759 462 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 TMEM125Q96AQ2 219 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 SLC35A4Q96G79 324 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 SGCZQ96LD1 299 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 PANX1Q96RD7 426 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 NODALQ96S42 347 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 FAM107BQ9H098 131 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 RABEP2Q9H5N1 569 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 TIMMDC1Q9NPL8 285 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 ASF1BQ9NVP2 202 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 CBLCQ9ULV8 474 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 PCDHGB4Q9UN71 923 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 TRIM33Q9UPN9 1127 aa14.73□□□□□ -0.05
USP39-205ENST00000442708 CCDC154A6NI56 674 aa14.72□□□□□ -0.05
USP39-205ENST00000442708 PEX1O43933 1283 aa14.72□□□□□ -0.05
USP39-205ENST00000442708 REM1O75628 298 aa14.72□□□□□ -0.05
USP39-205ENST00000442708 RASAL1O95294 804 aa14.72□□□□□ -0.05
USP39-205ENST00000442708 NAGAP17050 411 aa14.72□□□□□ -0.05
USP39-205ENST00000442708 HOXB9P17482 250 aaPredicted RBP14.72□□□□□ -0.05
USP39-205ENST00000442708 UQCRC2P22695 453 aa14.72□□□□□ -0.05
USP39-205ENST00000442708 RFC3P40938 356 aa14.72□□□□□ -0.05
USP39-205ENST00000442708 IRX1P78414 480 aaPredicted RBP14.72□□□□□ -0.05
USP39-205ENST00000442708 C19orf57Q0VDD7 668 aa14.72□□□□□ -0.05
USP39-205ENST00000442708 UBAP2LQ14157 1087 aaKnown RBP14.72□□□□□ -0.05
USP39-205ENST00000442708 CYP27C1Q4G0S4 372 aa14.72□□□□□ -0.05
USP39-205ENST00000442708 PAGE3Q5JUK9 113 aa14.72□□□□□ -0.05
USP39-205ENST00000442708 RNFT1Q5M7Z0 435 aa14.72□□□□□ -0.05
USP39-205ENST00000442708 PRAMEF20Q5VT98 475 aa14.72□□□□□ -0.05
USP39-205ENST00000442708 SLC22A10Q63ZE4 541 aa14.72□□□□□ -0.05
USP39-205ENST00000442708 SAXO2Q658L1 398 aa14.72□□□□□ -0.05
USP39-205ENST00000442708 CDC73Q6P1J9 531 aa14.72□□□□□ -0.05
USP39-205ENST00000442708 DNAJC14Q6Y2X3 702 aaPredicted RBP14.72□□□□□ -0.05
USP39-205ENST00000442708 SPATA21Q7Z572 469 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms