RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 ZNF568Q3ZCX4 644 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 SERTAD4-AS1Q5TG53 156 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 OR5M10Q6IEU7 315 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 SLC27A1Q6PCB7 646 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 PODNL1Q6PEZ8 512 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ZBTB49Q6ZSB9 765 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 POLNQ7Z5Q5 900 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ZNF605Q86T29 641 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 FAM219AQ8IW50 185 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 FAM109AQ8N4B1 249 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 GRPEL2Q8TAA5 225 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ACTRT1Q8TDG2 376 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ARNTL2Q8WYA1 636 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 WDYHV1Q96HA8 205 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 BOD1Q96IK1 185 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CSPG4P5Q96PW8 444 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CRAMP1Q96RY5 1269 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 TMEM47Q9BQJ4 181 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CHRDL1Q9BU40 450 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 BCL2L14Q9BZR8 327 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 TM6SF2Q9BZW4 377 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ZNF541Q9H0D2 1346 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 WWP1Q9H0M0 922 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 PDZD7Q9H5P4 517 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CDCP1Q9H5V8 836 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ANKRA2Q9H9E1 313 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 UGT1A7Q9HAW7 530 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 UGT1A10Q9HAW8 530 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 UGT1A8Q9HAW9 530 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ASAH2Q9NR71 780 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 OSER1Q9NX31 292 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 PISDQ9UG56 409 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 RWDD2AQ9UIY3 292 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 POFUT2Q9Y2G5 429 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 STARD10Q9Y365 291 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 GRIP1Q9Y3R0 1128 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CPQQ9Y646 472 aa5.51□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CBY3A6NI87 242 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 F8VP50 259 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 MSI1O43347 362 aaKnown RBP5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 KDELR3O43731 214 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CNTN5O94779 1100 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 NOL4O94818 638 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 NDUFB10O96000 172 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 F10P00742 488 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CNR1P21554 472 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 HNRNPH3P31942 346 aaKnown RBP5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 HCAR3P49019 387 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ARRB1P49407 418 aaPredicted RBP5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 RAB9AP51151 201 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 P2RY4P51582 365 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CDH17Q12864 832 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 DNASE1L3Q13609 305 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CD300EQ496F6 205 aaPredicted RBP5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 PRR23BQ6ZRT6 265 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 BBS7Q8IWZ6 715 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 AMER2Q8N7J2 671 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 Q8NA96 180 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 SLC44A5Q8NCS7 719 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 FAM71CQ8NEG0 241 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 BEST2Q8NFU1 509 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 OR5T3Q8NGG3 340 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 C2CD4CQ8TF44 421 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 GDPD5Q8WTR4 605 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 TXNDC15Q96J42 360 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 C9orf72Q96LT7 481 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 SCNM1Q9BWG6 230 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 NXF3Q9H4D5 531 aaKnown RBP5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 WDR76Q9H967 626 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 SAP30LQ9HAJ7 183 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 RANGRFQ9HD47 186 aaPredicted RBP5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 TXNDC16Q9P2K2 825 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 PRG3Q9Y2Y8 225 aaPredicted RBP5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 HEMK1Q9Y5R4 338 aaPredicted RBP5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 PCM1Q15154 2024 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ZNFX1Q9P2E3 1918 aaKnown RBP5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 GRXCR1A8MXD5 290 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ANKRD66B4E2M5 251 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ARPC3O15145 178 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 MID1O15344 667 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 TRIM49P0CI25 452 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 TRIM49CP0CI26 452 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CBR1P16152 277 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 IGFBP2P18065 325 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 DTYMKP23919 212 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ITGA3P26006 1051 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CASP1P29466 404 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 KCNJ3P48549 501 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CXCR3P49682 368 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 NAPAP54920 295 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 MYBPC1Q00872 1141 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CNTN2Q02246 1040 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 NHLH1Q02575 133 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 FGL1Q08830 312 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 DMWDQ09019 674 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 HLXQ14774 488 aaPredicted RBP5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 NAB2Q15742 525 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 IL17AQ16552 155 aa5.5□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 TMEM44Q2T9K0 475 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms